Chlamydia psittaci 01DC11: CPS0A_0009
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Entry
CPS0A_0009 CDS
T01860
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
chs
Chlamydia psittaci 01DC11
Pathway
chs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CPS0A_0009 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chs03400
]
CPS0A_0009 (recB)
Enzymes [BR:
chs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CPS0A_0009 (recB)
DNA repair and recombination proteins [BR:
chs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPS0A_0009 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_22
AAA_30
AAA_11
ResIII
AAA_12
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AEG86041
LinkDB
All DBs
Position
complement(7916..11053)
Genome browser
AA seq
1045 aa
AA seq
DB search
MKPFDIFHPETSIQGKYFLEASAGTGKTFTIEQIVLRALLEGSVSHVENILVVTFTNAAT
NELKLRIQENLKQAASQLKSAITNPEHPLPPYLSPPCDVKQLYMQVRNALASIDRMAIFT
IHGFCNYVLQQHFPEMQISQKNSALTHSQTVLHHIRKYLSQDLWENVLFPEQFYLLAARY
NSNSKHTSFLTDKLLSSYTVQTFDHLPSKSTTTSLLNTWHSSIRSKIKDIPKENFLEQAL
KYTESFKKQPFSITEDLLSFVDHLYASETSVRLLSFSKIAETFHPKNRLARYQPCHAFSY
IEETSWFQDTEQFCNVDSIFNTLLHDLQLYLKNHYTWWLSPDESIVTLEELLRSSQAEEV
IKSLRKRFQLILIDEFQDTDRKQWNIFAKLFAHNDFSGSLFLIGDPKQSIYEWRNADLVT
YLKAKSTFPKTSQLHLINNYRSTPQLMQAINILFCKCSPFLEIPGYEPIEYHSLTPQSSE
YFDNSQHAPIHLFSYDNVLDQAAWISQTASHLQATHGISFGRMAILVSDSAQAFDLITHC
SIPVSFSKNKSIFHLTETYLLTIAWLEAILYPENYEKIQRVLLSSLFRHDLTDILEKKEH
YSSYFFSLRSYIFDHGLLATFYHFMTLHGEALLKTPQGDLTFQEMERLCAYLGTLSSQPQ
HQLLYLQYFSETGRWEENLSFSSYSEDTEILKITTIHASKGLEYDVVFCPGLDKSKKNKS
SSEWIREMYVACTRAKKQLFIPFQTSLNSRRNTALTNYVKQEGSYASILDLAQNLSKEHP
SLFSLSTTHRQDPSTEPIYNLTPPSTFVLSPYPTKQIFSFSSVKTMLDNEVLVDSDIENP
SISSALPKGRKTGIIIHKILENISPNFKIPISKILTTVSHFVKNTHLEGYEEMIAQKLFS
TISSPLSFTSASFALKDVCPDKILSEEAFLFSNKEQLWQGAIDLFFEYNGKYYIIDWKTS
FLGETTSKYSQENLFAYIKEHNLDYQGAIYIHAAKRFLQQFDITSDVEMGFVFIRGIDSE
GNGFLCLPNYKTFNPTIDQKYPVYH
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgtttgatatttttcatcctgaaacatctatccaagggaaatattttctagaa
gcttctgcgggtactggaaagacatttaccatcgaacaaattgttttacgtgctctttta
gaaggttctgtttcccatgttgaaaatattcttgttgtaacatttacgaatgccgctact
aatgagttaaaacttaggattcaagagaacctcaaacaagctgcatcacagttaaaatct
gccattacaaaccccgagcaccctttgcctccttacttatcccctccctgtgatgtaaag
cagctttacatgcaggtgcgtaatgctttagcttcgatagatcgtatggcaatttttacc
atccacgggttttgtaattacgttttgcaacagcattttccagaaatgcaaatctcgcaa
aaaaactcggctcttacgcactcacaaacggttttacatcatattcgtaagtatttatcc
caagatctttgggagaacgtcttatttcctgaacaattttacttacttgcggcacggtat
aactctaattccaaacacacatcttttttgacagataagttactttcaagttacacagtc
cagacttttgatcacctaccatctaaaagcaccaccacatccttgttaaacacttggcat
agctctattcgatctaaaatcaaagatatccctaaagaaaacttcttagaacaagctctt
aaatatacggagagtttcaaaaaacagcctttctctataactgaggaccttctatccttt
gtagatcatttgtatgcttcagaaacatcagtgcgcctgctttctttttctaagatagca
gaaactttccatcccaaaaatcgtttagcacgttatcaaccttgtcacgcttttagctat
atagaagaaacatcatggtttcaagataccgagcaattttgcaatgtagacagtattttc
aacaccttgcttcacgacttacaattgtatttaaaaaaccactacacttggtggctatct
ccagatgaaagcattgtcacactagaagagctgctgcgctcttctcaagctgaagaagtg
ataaaatccctaagaaagcgattccagctcatattaatcgatgaatttcaagatacggat
aggaaacaatggaatatttttgcaaaactatttgctcacaatgatttctctggatcccta
tttctaataggtgatcccaaacaatcgatttatgaatggagaaatgctgatctcgttacc
tatttaaaagcaaaatctacatttcctaaaacgtcacagctgcatcttatcaacaactac
cgttctacaccacagttgatgcaggccatcaatattctcttctgtaaatgttctcctttt
ctagaaattcctggttatgaacctatagaatatcattccttaaccccacagagttcagag
tattttgataactcccaacatgcgcctattcacttattttcttatgacaatgttcttgac
caagctgcgtggatatctcaaacagcttcacatttacaagctactcatggaatctctttt
ggacgcatggcaattttagtatcggattcggctcaagcattcgatttaataacccactgc
agtattcctgtatcattttctaaaaataaatcgatatttcatcttactgaaacatatcta
ttaaccatagcttggctagaggctatcctctatccagaaaactatgaaaaaatacaaagg
gttttactgagtagcctatttcgacatgacctcaccgatattctagagaaaaaagaacac
tactcctcttattttttctctctacgcagttatatttttgatcatgggcttttggctaca
ttttatcatttcatgactcttcatggagaagctttactcaaaactcctcaaggagacctg
actttccaagaaatggaaaggctttgtgcatacttaggaacgctttcttcacaacctcaa
caccaacttctctatttgcaatatttctcagagacaggacgttgggaagaaaacctgtcg
ttttcatcttattccgaagacacagaaatcctaaaaatcactacaattcacgcatctaag
ggattggaatatgatgttgttttttgcccaggactagataaatcaaaaaaaaataaaagt
tcttcagaatggataagagaaatgtacgtagcgtgtactcgagctaaaaaacaactcttt
atccctttccaaacttctttaaattcaagacgcaataccgctcttacaaactatgtaaag
caggagggatcgtatgcatctatcctcgatctcgcccaaaatttatccaaagagcatccc
tccttattttctttatcaaccacacacagacaggatccatccactgagcctatttataac
cttaccccaccttcaacttttgtgttatcgccctatcctacaaaacagattttctctttc
tcctctgtaaaaacgatgttagataacgaagtgcttgtagatagtgacattgagaaccct
tcgatctcttcagcacttcctaaaggaagaaaaacgggtattatcattcataaaatccta
gagaatatatctccaaattttaaaattcccatttctaaaatcttaactacagtctcacac
ttcgtgaaaaacactcatttagaggggtatgaagaaatgatcgcacaaaagcttttctca
actatttcttcaccgctatcttttacctccgcatcctttgccttaaaagatgtctgccct
gacaaaatacttagtgaagaagcctttctcttttctaataaagaacagttgtggcaggga
gcaattgacctatttttcgagtataatggcaagtattacattatagattggaaaacatcc
ttcttaggagaaactacctcaaaatattctcaagaaaatctctttgcttacatcaaagag
cataacctggattatcaaggtgccatttacatccatgcagcaaaacgctttttgcaacaa
tttgatattaccagtgacgtagaaatgggatttgtatttattcgaggtatcgattctgaa
ggaaacggctttttgtgcttaccaaactacaaaacatttaatcccacaatagaccaaaaa
tatccggtctatcattag
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