Chlamydia psittaci 08DC60: CPS0D_0204
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Entry
CPS0D_0204 CDS
T01862
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cht
Chlamydia psittaci 08DC60
Pathway
cht03410
Base excision repair
cht03430
Mismatch repair
cht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CPS0D_0204 (recJ)
03430 Mismatch repair
CPS0D_0204 (recJ)
03440 Homologous recombination
CPS0D_0204 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cht03400
]
CPS0D_0204 (recJ)
DNA repair and recombination proteins [BR:
cht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CPS0D_0204 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPS0D_0204 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPS0D_0204 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AEG88167
LinkDB
All DBs
Position
191831..193603
Genome browser
AA seq
590 aa
AA seq
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MASKDNSSVSNPTWIYPKYDPALLSSIIKELHLHPVAAQTFISRGFQTVDEVRDFLYVHL
SNLHDPELLLDMSKAVQRLLLAKERGEHVMVYGDSDVDGITGVALLVEFLRSIEMKVSYC
FLGAFLKHYGEPSLLIAKMKEEGVTLLITVDCGITAGKEVSDINKQGIDVIVTDHHMPTG
KIPHCIATLNPKLRDHTYPNKDLTGVGVAFKLARGVVNALQKNNPKLKLDIKHLLDLVTL
GTVTDVGTLLGENRTMVRHGIKEIAKGSRLGLRKLCIFSGVKPSEVTSTDIVLKISPKLN
SLGRLADASKGVELLLTKDPEVADDLIQYLDKINRERQKIEADVFHDVQKILKNQPDIVK
QAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGIGKGSLRTIGSFPLLGILQKC
SPMFISYGGHDFAAGIIINEDRIEAFRKKFIHLVNSSLKKEKAVVTLPLDARADFDEIDH
DLLSSIDLFEPFGKGNPVPIFYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDR
IGALKASWNQPLELAYTPRLSQSANGGVIHLLVRDFRILPLNYKDTTARF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagataattcttctgtatctaatcctacttggatatatcctaagtacgat
cccgctctactttcttctattataaaggagttacatcttcatccggttgctgcacagact
tttatttctcgaggatttcaaacggtagatgaagttcgtgattttctttatgtacatcta
tccaacctgcatgatcccgaacttttactcgacatgtcaaaagctgtacaacgtttgctt
ctcgcaaaagaacgtggtgagcatgtcatggtctatggagatagtgatgttgatgggata
acaggcgtggctcttcttgtagagtttttgagatctatagaaatgaaggttagctattgt
tttttaggagcattcctgaaacattatggcgaaccttctctgttgattgccaagatgaag
gaagaaggcgtcactttgctgattaccgtagattgcgggattactgcagggaaagaagtc
agtgatatcaataagcaaggcattgatgtcattgttacagatcatcatatgcctacaggt
aaaatccctcattgcatagcaacattaaatccaaagctcagagatcatacttatccaaat
aaagatctcactggtgtaggcgtcgcttttaaactcgcccgtggtgttgttaacgcgtta
cagaaaaacaatccaaaactcaaattagacattaagcatttattagatttagtaactcta
gggacagtgacggatgtgggaacccttttaggagagaatcgcaccatggttcgccacggc
attaaagaaatcgccaaagggtcacggttagggttgcgtaaattatgcattttttcaggg
gtaaaaccttcagaggttacctctacagatattgttttgaaaatttctccaaaactgaat
agtttaggaagacttgccgacgcttctaaaggcgttgaattgttgctgaccaaagatcca
gaagttgctgatgacctcattcaatatctcgataagatcaatagagaacgccaaaaaata
gaggctgacgtattccatgatgtacaaaaaatcttaaaaaatcagcccgatatcgttaaa
caagcagctattgtactatcgtcacaagattggcattccagagtcattcctattatttca
gcacgcctagcgaaagcttataataagcccgtagcgattatttctaatcagggagggata
gggaaaggatcgttaagaacaatagggtctttccctctccttggaatattacaaaagtgc
tctcctatgttcatatcctatggaggacatgattttgcagcaggcattatcattaatgaa
gaccgaatagaagcttttaggaaaaagttcattcatcttgtgaattcatcgttaaaaaag
gaaaaagctgtagttacccttcccttagatgctcgagctgattttgatgagatagatcac
gatttactctcttccatcgatctgttcgaaccttttggcaaaggtaatcctgtacctatc
ttttataccatagtacatcaagtacgttatccgaagttattaccagggaatcatctgaaa
ctctatcttaattacggagaaagaaacttagaaggcatagcttttggattaggggataga
ataggagctctaaaagcgagttggaatcaacctttagaactggcttatacaccacgttta
tcccaatctgctaacggaggagtcattcatttgttagtgcgtgattttcgtattcttcca
ctaaattacaaggatacaacagcaaggttttaa
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