Chlamydia psittaci 08DC60: CPS0D_0749
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Entry
CPS0D_0749 CDS
T01862
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cht
Chlamydia psittaci 08DC60
Pathway
cht03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cht00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CPS0D_0749 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cht03021
]
CPS0D_0749 (rpoB)
03400 DNA repair and recombination proteins [BR:
cht03400
]
CPS0D_0749 (rpoB)
Enzymes [BR:
cht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CPS0D_0749 (rpoB)
Transcription machinery [BR:
cht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CPS0D_0749 (rpoB)
DNA repair and recombination proteins [BR:
cht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CPS0D_0749 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AEG88650
LinkDB
All DBs
Position
complement(798112..801870)
Genome browser
AA seq
1252 aa
AA seq
DB search
MFKCPERVSVKKKEDILDLPNLIEIQIKSYKQFLQIGKLAEERDNIGLEEVFREIFPIKS
YNEATILEYLSYNLGVPKYSPDECIRRGITYSVTLKVRFRLTDETGIKEEEVYMGTIPIM
TDKGTFIINGAERVVVSQVHRSPGINFEQEKHSKGNILFSFRIIPYRGSWLEAIFDINDL
IYIHIDRKKRRRKILAITFIRALGYSSDADIIEEFFQIEEHSLKSEKDFSFLVGKILADN
VLDEASSLVYGKAGEKLSTAMLKRMLDANISTLKIAVEADENHPIIKMLAKDPTDSYEAA
LKDFYRRLRPGEPATLANARSTIMRLFFDPKRYNLGRVGRYKLNRKLGFPMDEESLAQVT
LRKEDVIGALKYLIRLKMGDEKASIDDIDHLANRRVRSVGELIQNQCRSGLARMEKIIRE
RMNLFDFSSDTLIPGKIISAKGLASVLKDFFGRSQLSQFMDQTNPVAELTHKRRLSALGP
GGLNRERAGFEVRDVHASHYGRICPIETPEGPNIGLITSLSSFAKINEFGFIETPYRIVR
GGVVTDEIEYMTADVEEECVIAQASANLDEYNMFVDPVCWARYRGEAFEADTSTVTHMDV
SPKQLVSIVTGLIPFLEHDDANRALMGSNMQRQAVPLLKTEAPIVGTGLEARAAKDSGAI
VVAEEDGVVEYVDGYKVVIAAKHNPTLKRTYDLKKFLRSNSGTCINQRPLCSVGDVVVKG
DVIADGPATDKGELALGKNILVAFMPWYGYNFEDAIIISEKLIKQDAYTSIYIEEFELTA
RDTKLGKEEITRDIPNVSEEVLANLGEDGIIRIGAEVKPGDILVGKITPKSETELAPEER
LLRAIFGEKAADVKDASLTVPPGTEGVVMDVKVFSRKDRLSKSDDELVEEAVHLKDLQKG
YKNQISVLKTEYREKLGALLLNEKAPASIIHRRTADILVQEGTVFDQETIELLEQESLVD
LLMPPCDMYDVLKSLLSDYETSLQRLEVNYKTEVEHIREGDADLDHGVIRQVKVYVASKR
KLQVGDKMAGRHGNKGVVSKIVPEADMPYLANGETVQMILNPLGVPSRMNLGQVLETHLG
YAAKTAGIHVKTPVFEGFPESRIWDMMIEQGLPADGKSYLYDGKTGERFDNTVVIGYIYM
LKLSHLIADKIHARSIGPYSLVTQQPLGGKAQMGGQRFGEMEVWALEAYGVAHMLQEILT
VKSDDVTGRTRIYESIVKGENLLKSGTPESFNVLIKEMQGLGLDVRPMVVDA
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatgcccggagcgggttagcgtcaaaaaaaaggaagatatcttagatcttcca
aatcttattgaaattcaaattaagtcatataagcaatttcttcagattggtaagcttgca
gaagagcgcgataatatcggcttagaagaggttttcagagagatttttccaattaaatct
tataacgaagctaccattttagagtatctatcttataacttaggtgtgccgaaatattct
cccgacgagtgtatccgtcgcgggatcacctatagtgttactttaaaagttcgcttccgt
ttgactgatgaaacaggaattaaggaagaagaagtctatatgggcactatacccattatg
acagataaaggaacctttattattaacggggctgaaagggttgttgtttctcaagtacac
cgttctccagggattaatttcgaacaggaaaaacattctaaaggaaatattttgttttct
ttcagaattattccttatcgaggtagttggctagaggctatttttgatataaatgattta
atttatatccatattgatagaaagaaacgtcgccgcaagattttagctataacgtttatc
cgtgccctagggtattcatctgacgctgatattattgaagagtttttccaaatagaagaa
cattctttaaaaagtgaaaaagatttttctttcttagttggtaaaatcttagctgataat
gttttagatgaagcttcttctttggtttacggaaaggctggagaaaaacttagcacagct
atgttaaaacgtatgctcgatgctaatatctcgactttaaaaatagctgtagaggctgat
gaaaatcaccctatcatcaaaatgttggccaaagatccaacagactcttatgaagctgct
ttaaaggatttctatagaagattgcgccccggtgagcctgcgaccttggcaaatgctcgt
tctacaattatgcgtctgttctttgatcctaaacgctataacttaggaagagtaggtcgt
tataaattaaatagaaaacttgggttccccatggatgaagagtccttagcacaagtgacc
ttaagaaaagaagatgttattggtgctctgaagtatcttatccgtttaaaaatgggtgat
gaaaaagcttcgattgatgatatcgaccatttagctaaccgtcgtgtacgctctgtagga
gaacttatccaaaaccaatgccgctccggattggctagaatggaaaaaattatccgagag
agaatgaatttatttgatttctcttctgatacattgattccaggaaaaattatctctgca
aaaggtctcgcaagcgttctaaaggactttttcggtcgttctcagctttctcaattcatg
gatcaaacgaaccctgtggccgaattaacacataagcggcgtttgtcagctttggggcct
ggaggtttgaatagagaaagagctggatttgaagttcgtgacgtgcatgcgagccattac
ggacgtatatgtccaattgagactccagaaggaccaaacattggtttgattacttctcta
tcttcctttgcaaaaattaacgaattcggattcattgaaactccttatcgtatcgttaga
ggtggggtagttactgatgaaatcgaatacatgactgctgatgtcgaagaagaatgtgtg
attgctcaggcttcagcgaatttagatgaatataatatgtttgtcgatcctgtatgctgg
gcaagatatcgtggagaggcttttgaagcagacacaagtaccgttacgcatatggacgtt
tctccaaagcaattggtatcgattgttacaggtttaattccatttttagagcatgacgat
gctaaccgtgctcttatgggatcaaacatgcaacgtcaagctgttcctttattgaaaact
gaagctcctattgttggaacaggtttagaagcacgtgctgctaaagattccggtgctatt
gttgttgctgaagaagacggagtcgtagaatatgttgacggttataaagtagttattgca
gctaaacataacccaacacttaaacgcacttacgatcttaaaaagttcttaagatcaaac
tctggtacctgcattaatcaacggcctttatgtagtgtgggagatgttgtagtcaaaggt
gatgttatagctgatggtcctgctacagataagggagaacttgctttaggaaagaacatc
ttggttgccttcatgccttggtatggatataacttcgaagatgcgattatcatttctgaa
aagttgattaagcaagacgcttatacctcaatttatattgaagagtttgaattaacagct
agagacacaaaattaggaaaagaagagattactcgtgacattcctaacgtttctgaagaa
gtcttggctaacttaggtgaagatggaattattcgtattggagctgaagtaaagcctggc
gacattcttgttggtaaaattactccgaaatcagaaacagaattagctcctgaagaacgt
ttattacgagcaatcttcggagagaaagctgctgatgttaaagacgcttctttgactgta
cctccaggaacagagggagttgtcatggacgtgaaagtcttcagtagaaaagatagactt
tctaagagtgatgacgagcttgtagaagaagctgttcatttgaaagacctacagaaaggt
tacaagaatcagatttcagtattaaaaacagagtatcgtgaaaaattaggagctctattg
ttaaatgaaaaagctccagcttcgattatacatcgtcgtactgccgatattctggttcaa
gaaggtactgtatttgatcaagagacaatcgaattgcttgagcaagagtctttggtcgat
ctccttatgcctccttgcgatatgtatgatgttttaaaatcactactttctgattacgag
acatccttgcaacgtttggaagtcaattataaaacagaagttgaacatattcgtgaaggt
gatgctgatcttgatcacggtgtgatccgccaggttaaagtatatgttgcttcaaaaaga
aagctgcaggttggagataaaatggctggacgtcacggaaacaaaggagttgtttctaag
attgttcctgaagctgatatgccataccttgctaacggcgaaactgtacagatgatctta
aacccccttggtgtgccttctaggatgaacttaggtcaggtattggaaactcatcttggt
tacgctgcaaaaactgccggtattcatgtaaaaactccagtatttgaaggtttcccagaa
tctcgtatctgggacatgatgatagaacaaggtttgcctgcagatggtaagtcttacttg
tatgatggaaagactggagagagattcgacaatactgtggtaatcggatacatttacatg
ttgaagctaagccacttaattgcagataaaattcacgccagatccattggtccttactcc
ttggtcactcagcaacctctcggaggtaaagctcaaatgggaggtcaaagattcggagag
atggaagtttgggctttagaagcttatggggtagctcatatgctccaagagattcttaca
gttaaatcggatgacgttactggtcgaacaaggatttatgaatccattgttaaaggagaa
aacctcctgaagtcaggaacgccagagtcgtttaatgttttaattaaggaaatgcaaggt
ctaggacttgatgttcgtcctatggtagtagatgcttaa
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