Chlamydia psittaci 08DC60: CPS0D_0990
Help
Entry
CPS0D_0990 CDS
T01862
Name
(GenBank) SNF2 family helicase
Organism
cht
Chlamydia psittaci 08DC60
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
SWIM
DUF5364
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AEG88867
LinkDB
All DBs
Position
complement(1059653..1063150)
Genome browser
AA seq
1165 aa
AA seq
DB search
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQVRGLYDNVYECEIE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLERYFNEMVVAYSQEANLETNQEINEDVKK
ELQETFVAAANREEERKDRAHQKEILSEYIHAANVLSANPFFLPQEYLEKNSAELAVLFV
ASNDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRHFFFTMQSF
NASDRKLIDLLIRYVRYANQPPEEKLLKSAYLTLTSLGVILAKMYEHQMADRGGCQSGEK
ESFSGIFCGNLEEPLYWSVTPAKMKFDLDFFDTPYKALLMTPLILVDDDTLQPEQAILLE
SNVPGIIHNNVYHHFAPQIRRAHLRSFSKLRDVTIPEALFGSFRENALPVFKEYAEVSNV
EVLNSFVTLPYVEDVRGECNISYLDGELEAKLYFIYDDLRVPAVPFSLQFDEIRAFIRED
GILARNLVEERKIIDEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
LSDQFIYDETVFDLAFREGSEVNTYEAELKVNGYLKGISLDLLWDCISAKKRFLELPKKG
RHVKTRRGRASGSTKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCPLWSLTGISPE
LFKGLPVNFKMTKKLAEIQKQIRGEVDFKFQEIPQQIQATLRSYQTEGIHWLERLRKMHL
NGILADDMGLGKTLQAIIAITQSKLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTVII
DGVPSYRRRQLANLSDYDVAITSYNLLQKDIDVYKDFVFDYVVLDEAHHIKNRTTRNAKS
VKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDNM
VALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTDSQKELYHSYAASAKKELSRLVKQ
EGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVLF
SQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLNL
VGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLV
KKVINSDDEVVSKLTWEEVLELLQI
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattttcgcaaattacgaagggattttacagctaacattttgcaagatggcaag
gaactttttgaccaaggagctgtgattaatgcgaaaatcctgtctatgaatggagaatca
gtctgcataggagcgcaggttcgagggctatatgacaacgtatatgaatgtgaaatagaa
gttgatcgatcgaaatctgataccatagattctaactgtgactgttcttataactatgat
tgtcagcatatagtagcgctgctgttttatttagaaaggtatttcaatgaaatggtagtg
gcttattctcaagaagctaacttagagacgaatcaagagataaacgaagacgttaaaaaa
gaacttcaggaaacttttgtcgctgctgcaaatagagaagaagaaagaaaagaccgtgct
catcaaaaagaaatcttaagtgagtacattcatgcggctaatgtattaagcgcaaatcca
tttttccttcctcaggaatatctcgagaagaattctgcagagcttgccgttttatttgtt
gcttccaatgatgaagtattccgtccgaaccagcatgtagaatttcaattagttttacgt
cttcctggtcgttctaaaccgttttacatttcaaacattaagacatttcttgaaggagtg
ttgtatcaagagcctattatcttgaacgggcgtcacttctttttcacaatgcaatctttt
aatgcttccgatcgcaagcttatagatttgctgattcgttacgtgcgttatgctaaccaa
cctcctgaagagaaactgttgaaatcagcgtaccttacgttaacctctttaggtgtcatt
ttagcaaagatgtatgaacatcaaatggcggatcgtggaggatgtcaatctggagagaaa
gaaagtttctcaggaatattctgtgggaatcttgaggagcctttatattggtctgttact
ccagctaagatgaagtttgatttagactttttcgatactccatacaaagcattgttaatg
actccattgatccttgtggatgatgacacgcttcagccagagcaagcgattcttttggaa
tctaatgttcctggtattattcataacaatgtataccaccattttgctcctcagattcga
cgtgcgcatttgcgttctttctcgaagttgcgtgatgtgactataccagaagctttattt
ggttctttccgagaaaatgctcttcctgtgtttaaggaatatgcagaggtttctaatgtc
gaagttctgaattcatttgtcactcttccttatgttgaggatgttcgaggtgaatgcaac
atcagttacttggatggggagctagaggcaaagttgtatttcatctatgatgatctcagg
gttcctgctgttcctttctctttgcaatttgatgagatccgcgcgtttattcgtgaagat
gggattctagcaaggaatcttgttgaagagcgcaagataatagacgaggtcttttctggt
tttatctatgacgagcgagacggggcttttcatgtaaaaagtgaaaagaaaattgttgag
tttatgacggaaactattcctaataaccaacacaggatcacatttaattgtcctgaaacc
ctttctgatcagtttatttatgatgaaactgtctttgatcttgctttcagagaaggttct
gaagtcaatacttatgaagcagaactgaaagtaaacggttacttgaaaggaatcagccta
gacctactttgggattgcataagcgctaaaaaacgtttcttagagctaccgaagaaaggg
cgtcatgttaagacgcgcagaggtagagcttcaggttctacaaaacttccttgtattttg
gttttagacctagagaagatatctccagttattcagatctttaatgaaatcggttttaaa
gttctggatgattttgtagagaagtgtcctttatggagtttaacggggatttctccggag
cttttcaaaggtcttcctgttaactttaaaatgacgaaaaagttggcagaaatacaaaaa
caaattcgtggagaagttgattttaaattccaagagattcctcagcagatacaggcaaca
ttgcgtagttatcaaactgaagggattcattggttagaacgtcttagaaagatgcatctc
aatggtattcttgccgatgacatggggcttggaaagactttacaagcaattattgcgatt
acgcaaagtaagttagagaagggcaagggatgttcgttaattgtctgtccaacatctttg
gtatacaactggaaagaagagttccgtaaatttaatccagaatttaagactgtgattatt
gatggtgtcccttcatatagacgtagacagttggctaatttgtcggattatgatgtggcc
attacctcgtataacctattacaaaaggatatcgatgtatataaggattttgtctttgat
tatgtagttttagatgaagcccatcatattaagaaccgtacaacgcgtaatgcgaaatct
gtaaaaatgattcgttcggggcatagattaattctcacgggtactccgattgaaaattct
ttggaagagttgtggagtttattcgatttcttgatgcctggcttattaagcagttacgat
cgctttgttggtaaatacatccgtacgggcaactacatggggaataagaccgacaatatg
gtggctttgaagaagaaggtagcgccatttattcttcgtcgtatgaaagaagatgtattg
gaagatttgcctcctgtttcggagattttgtatcactgtcatcttacagattcgcagaaa
gaactctatcattcttacgcagcttcagctaagaaagagctttctcgtttggtgaaacaa
gaaggttttgatcgtattcatattcacgttcttgccacactgactcgtttaaaacagatc
tgttgtcaccctgcgatttttgcaaaagacgttcctgagccaggagattctgcaaagtat
gacttactgatggatcttctttcttctcttgtggagacaggacataaaacggttctcttt
agtcagtataccaagatgttgagtatcatcaaaaaggacttagaggctcgtggagttcgt
tttgtttatttggatggttccaccaagaacagattggaaatcgtgaaccagtttaacgag
gatcctggattattagtcttcttgatttctttaaaagcagggggaacagggttgaacctt
gttggtgcagatacagtaattcactatgatatgtggtggaatcctgctgtagaaaatcaa
gcgacggatcgtgtgcatcgtatagggcagaatcgttcggtgtcttcgtataagttagtt
acgttaaatacaatcgaagaaaaaattctaacgctgcaaaataggaaaaagagccttgta
aagaaagtgatcaactctgatgatgaagtcgtttccaagttgacttgggaagaagtacta
gaattgctacagatatga
DBGET
integrated database retrieval system
