Cytophaga hutchinsonii: CHU_0113
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Entry
CHU_0113 CDS
T00385
Symbol
secDF
Name
(GenBank) protein translocase subunit secD / protein translocase subunit secF
KO
K12257
SecD/SecF fusion protein
Organism
chu
Cytophaga hutchinsonii
Pathway
chu02024
Quorum sensing
chu03060
Protein export
chu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CHU_0113 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CHU_0113 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHU_0113 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chu02044
]
CHU_0113 (secDF)
Secretion system [BR:
chu02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CHU_0113 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
ABG57406
UniProt:
A0A6N4SMB1
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All DBs
Position
complement(137665..140640)
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AA seq
991 aa
AA seq
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MRNKNLIIALTVIVTALCFFYISFTFVARGVEKDAVDAATTADGKVDIQKKQAYMDSIYN
EPVYNFLGAKYTYKEVKSLELALGLDLQGGMHVVLEVSPVEILQAMAGSNAESADFKKAI
ELAKEKQRNSQGTFQQAFFDSYRSIAGANNLSKIFANATNKGKIDIRSTDKDVEKVINEE
IDLSVERSFNILRNRIDKFGAIQPNIQRIRGTGRILVELPGVENPQRVRNLLQGTAKLEF
MEVYQIYEIAEKTNRINDYLINLAEEKKTSSASDTSVAVTTTDNSSLLVTNSADKDAATV
KADTSAAAKDTSKVSDFYRLIQAQGGLIYKTTDTSIINKILALDRVKSIIGNDLRFVWDR
KANVVDGDVGYIELVPVKVGRDGKAALAGDVITNVGYGLSSDGKGYEVSMQMSPAGAKSW
RKITKAASQEQNKRRIAIVLDNSVYSAPTVQVEIPNGSSSISGNFTLDESKDLANILKAG
KLPAPVRIVEEVIVGPTLGQEAIMDGLVSMFAGIAIVILLLIMYYSKGGMVANIALVFNI
IFTLGFLASLNSVLTLPGIAGIVLTIGMSVDANVLIMERIKEELANGKSLLTAIELGYDK
AFSSIFDSNLTTILTGVILFFLGEGPVKGFATTLVLGVLCSFFTAVYITKLILLWMAKNK
SDNAISFDTFISKNAFKNLNFDFISKRKIAYVFSSAILIIGLVLTIIQGGLNLGVDFKGG
RSYIVEFKNPVVASDLRDGLNDYFEGNGTEVKTYGSDSKVKITTSYLVEDESADADKKVE
AALVKGAENYAKNSEFKILSSSKVGATVADDIKNASWKAMLASLIGIFLYIFLRFKKWQL
SLGGVVALFHDTLVVLAIFAILRVFNIDFEIDQVIVAALLTIIGFSINDTVVIFDRVREF
DKESSKLDMASMLNASINSTLSRTIMTTVIVLVSVLILFIFGGETLRGFSFALLIGVVFG
SYSTIFIAVPMLLDLRSKAEKEADDKILAGK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagaaataagaatttaattatcgcactcacagtgatagtaaccgcactgtgtttcttt
tacatctcattcacctttgtagcaagaggtgttgagaaagatgctgtagatgcagcaaca
acagcggatggaaaagtagacatccagaaaaaacaggcctatatggactctatatataat
gagcctgtatataacttcttaggtgcaaaatatacgtacaaagaagtgaaatctcttgag
ctggcattaggtcttgatttacaaggcgggatgcacgttgtgcttgaagtttctcctgta
gaaattttacaagctatggctggatcaaatgctgaaagcgctgatttcaaaaaggctatt
gaattagcgaaagaaaagcaacgtaacagccagggcacatttcaacaagcattttttgac
tcataccgcagcattgccggtgcaaataatctgagcaaaatttttgcaaatgctacaaat
aaagggaaaattgatattcgctctactgataaggatgtagagaaagtgatcaatgaagaa
attgatttgtctgttgagcgttcgtttaacattttacgtaatcgtattgataagtttggc
gccattcagccaaacatacagcgtatccgcggtacaggccgtatccttgttgaattgcca
ggcgttgaaaaccctcagcgtgttcgtaacctgttgcaaggaactgcaaaattagaattc
atggaagtatatcagatctatgaaattgcagagaaaacaaaccgtatcaacgactattta
ataaatcttgctgaagagaaaaaaacatcttctgcatctgatacttccgttgctgtaaca
actacagataattcttctttattggtaacaaactctgctgacaaagatgcagcaactgtt
aaagccgatacatctgctgcggcaaaagacacaagcaaagtttctgacttctaccgttta
attcaggctcaaggtggtcttatctataaaacaacagatacttcgatcatcaataaaatt
ttagcgcttgacagagtaaaaagcattatcggaaatgacttacgttttgtctgggacaga
aaagcaaacgttgttgacggagatgttggatatattgaattagtacctgtaaaggttggc
cgtgacggcaaagctgcattagcaggcgatgttattacaaacgtgggttatggtttatct
tctgatggtaaaggatacgaagtatctatgcaaatgagccctgcaggagctaagtcatgg
agaaaaattacaaaagctgcttctcaggaacaaaacaaaagacgtatagctattgtactt
gataactctgtatactctgcaccaaccgtgcaagttgaaattccaaatggcagctcgtca
atttccggaaactttacactggatgaatctaaagatttagcaaatatcttaaaagccggt
aaacttccagctccggtacgtatcgttgaagaagttatcgtaggtccaacgcttggtcaa
gaggctattatggatggtttagtatctatgttcgcgggtattgcaatcgttatcttattg
ttaattatgtactacagcaaaggtggtatggttgctaacattgcattggtgtttaacatc
atctttacattaggtttcttagcttctcttaactccgtacttacacttcctggtattgca
ggtatcgtattaaccattggtatgtcggtagatgcgaacgtcttgatcatggaacgtatc
aaagaagaacttgcaaatggcaagtcactgcttaccgctattgaacttggttatgacaaa
gcattcagttctatctttgactctaacttaacaacaattttaacaggtgttattttattc
tttttaggtgaaggcccggttaaaggtttcgcaacaacacttgtacttggtgtactttgt
tcattctttactgcagtatatattactaagctgatccttttatggatggcaaaaaacaaa
tcagacaatgctatttctttcgatacattcatttcaaaaaatgcatttaagaatttgaat
tttgacttcatttctaaacgtaaaatagcatatgtattctcttctgctatcttgattata
ggtttagtactaacaattatacagggcggccttaacttaggcgtagacttcaaaggtggt
cgttcatatattgttgaattcaaaaacccggttgttgcttctgatttaagagatggtttg
aatgattattttgaaggtaatggtacagaagttaaaacgtatggttcagattcaaaagtt
aaaataacaaccagttatttagtagaagatgaatctgcagacgctgataaaaaagtagaa
gctgctttagtaaaaggtgctgagaactatgctaaaaacagtgaatttaaaatattaagc
tcttctaaagttggtgctactgttgccgatgatattaaaaatgcttcgtggaaagctatg
ttagcttctcttatcggaattttcttatacatcttcctgcgattcaaaaaatggcagttg
tctttaggtggtgttgttgcattgttccacgatacactagttgttcttgctattttcgca
atcttacgtgtattcaatatcgactttgaaattgatcaggtaattgttgcagccttactg
acaattattggtttctctatcaatgataccgttgtaatctttgaccgtgttcgtgaattc
gacaaggaatcttcaaaattagatatggcaagcatgctgaatgcatctatcaacagtaca
cttagccgtaccattatgacaacggttattgtattggtatcggtgttgatcttgtttatc
tttggtggtgaaacattaagaggtttctctttcgccttattaataggtgtagtgtttggt
tcttactccacaatctttattgccgttccgatgttattagatcttagatctaaagctgaa
aaagaagctgatgataaaattttagcaggtaaataa
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