Cytophaga hutchinsonii: CHU_0266
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Entry
CHU_0266 CDS
T00385
Symbol
yajR
Name
(GenBank) tetracycline resistance protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chu02000
]
CHU_0266 (yajR)
01504 Antimicrobial resistance genes [BR:
chu01504
]
CHU_0266 (yajR)
Transporters [BR:
chu02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CHU_0266 (yajR)
Antimicrobial resistance genes [BR:
chu01504
]
Gene variants
Tetracycline resistance genes
Transporters
CHU_0266 (yajR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_4
PDGLE
BT1
OATP
DUF2929
Motif
Other DBs
NCBI-ProteinID:
ABG57558
UniProt:
A0A6N4SMQ5
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Position
322881..324098
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AA seq
405 aa
AA seq
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MTSHKKAGLGFVFVTLLIDVIGIGIILPVIPDLIKDLTGEGLSEAAKYSGWLTFAYAIMQ
FFFSPVLGALSDTYGRRPILLLSLLGLGFDYIFSAFAPTIGWLFVGRILAGISGASFTTA
TAYIADISTPENRTQNFGLVGVAFGLGFIIGPVVGGITGDWWGPRAPFMVAAVFTLLNVL
YGYFFVPESLAQENRRKFEWSRANPIGSLLHLKKYPVVAGLIVSMFLFFIAGHSVQSNWS
FFTEYRFNWDNKMVGYSLGFVGVIIAVVQGWLIRIIIPKTGQKWAVYLGLSLNALGLLLF
AFASQGWMMFAILAPYALGGIAGPALQGITSAQVPATEQGELQGALTSLMSVTTIIGPLL
MNNLFSYFTGANAPIELPGAPFLAGAVMVGVSVYLSVQTLRKYEG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacatcacataaaaaagccgggctcgggtttgtttttgtaaccttattaatagatgta
atcggcatcggcattattctgccggttattccggatctgatcaaagaccttaccggcgaa
gggttgagtgaggctgctaaatacagcggctggttaacgtttgcctatgccattatgcaa
ttcttcttttcacctgttctcggcgccttaagtgatacgtatggcagacgtccgatactg
ttgctgtctttacttggcttgggctttgattatatcttctctgcctttgcgccaaccatc
ggttggttgtttgtcggccgtatccttgcaggtatcagcggtgccagttttacaaccgcc
acggcgtatattgcagatatcagtacacctgaaaaccgcacgcagaatttcggactcgtt
ggtgtcgcttttggtcttggttttattattggtcctgtagttggcggcattaccggtgat
tggtggggcccacgcgcaccgtttatggttgctgctgtatttactttattaaatgtactg
tacggatatttctttgtgcccgaatcgttggcacaggaaaacaggcgaaaattcgaatgg
tcacgtgcaaatccgatcggttctttgctgcacttaaaaaaatatcccgtagtggcaggg
ttgattgtttccatgtttttgttttttattgcaggtcattccgttcaatcaaactggtca
tttttcacggaatacagatttaattgggataataaaatggttgggtattcattgggtttt
gtaggtgtgattatagctgttgtacaaggctggctgatacgcattattattcctaagact
ggccagaagtgggcggtttatctgggactttcattgaatgcgttaggtttgttgttgttt
gcatttgcatcacagggctggatgatgtttgccatactggcgccatatgcattaggcggt
attgcaggtccggcgcttcagggaatcacatctgcgcaggtgccggcaacagagcagggc
gaactgcaaggtgcactaacctcgctgatgagtgtaacaacaattataggaccgctgttg
atgaataatttgttttcgtatttcacaggagcaaacgctcccattgaattacccggagct
ccgtttttagcaggagcagtaatggttggcgttagtgtatacctgagtgtacaaacattg
agaaaatatgaaggctaa
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