Cytophaga hutchinsonii: CHU_0461
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Entry
CHU_0461 CDS
T00385
Symbol
ispA
Name
(GenBank) geranyltranstransferase (farnesyl-diphosphate synthase)
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu00900
Terpenoid backbone biosynthesis
chu01100
Metabolic pathways
chu01110
Biosynthesis of secondary metabolites
Module
chu_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CHU_0461 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
chu01006
]
CHU_0461 (ispA)
Enzymes [BR:
chu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CHU_0461 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CHU_0461 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
CHU_0461 (ispA)
Prenyltransferases [BR:
chu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CHU_0461 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
IFT52_central
Motif
Other DBs
NCBI-ProteinID:
ABG57750
UniProt:
A0A6N4SN87
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All DBs
Position
complement(541540..542517)
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AA seq
325 aa
AA seq
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MLLTTERLTKDISKAISKAEFGKEPTELYEPIRYIMDLGGKRMRPLLTILSNYIFTEDTN
NVMNAAIAVEVFHNFTLMHDDIMDNAPLRRGKATVHAKWNTNIAILSGDVMLVEAYKQLM
TIDEKYLKQVLDRFNETAAGVCEGQQFDMNFESLPTISVDDYINMIRLKTAVLLGFSMEL
GGILGDADEKSCTYLNTVGISAGIGFQLKDDLLDVYGDAATFGKQVGGDILANKKTFLLI
RALEKAAGKTKKDLEKLLTDKTISDKAKIEGVTNIYDQLGIKEETEALIQQHFNTAIESL
GKVKGSIFRKHYIKDYLLALIGREQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgttacttactacggaacgattaaccaaagacatttcaaaagctatttcaaaagctgaa
tttggtaaagaacccacagaactatacgaaccgatccgatacattatggatttaggagga
aagcgcatgcgcccgctcctgaccattctgtctaattatatcttcaccgaagatacgaat
aacgttatgaatgctgccattgcggttgaagtgttccacaattttacgctcatgcacgat
gatatcatggacaacgctcccttgcgcagaggaaaggcaaccgtgcatgcaaaatggaat
accaacatcgcaatcctttccggtgatgtaatgctggttgaagcatacaaacaattgatg
accattgatgagaaatacctgaaacaggtgctggatcgttttaacgaaacagctgcaggt
gtttgtgaaggacagcagtttgatatgaattttgaatcgctgcctactatttcggttgat
gattatattaacatgatccgcctgaaaactgctgtgttattaggtttcagcatggagctt
ggcggtattcttggagatgcggacgaaaaaagctgtacgtatttaaacacggttggaatc
tctgccggcattgggtttcagttaaaagatgatctgctggatgtgtatggtgacgctgct
acctttggtaaacaggttggcggtgatatccttgcaaacaaaaaaacgtttttactgatc
cgtgcgcttgaaaaagcagcaggcaaaacaaagaaagatctggaaaagctattgacggat
aaaaccatttcagacaaggctaagattgaaggtgtaaccaatatctacgatcagttaggc
attaaagaagaaacggaagcattgattcagcagcattttaatacagctattgagtcactg
ggcaaagtaaaaggatctattttccgcaaacattatattaaagattacctgcttgcactc
attggccgcgaacaataa
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