Cytophaga hutchinsonii: CHU_0506
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Entry
CHU_0506 CDS
T00385
Symbol
rsaD
Name
(GenBank) ABC transporter, ATP-binding protein/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHU_0506 (rsaD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chu02000
]
CHU_0506 (rsaD)
Enzymes [BR:
chu01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CHU_0506 (rsaD)
Transporters [BR:
chu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CHU_0506 (rsaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_22
AAA_25
SbcC_Walker_B
AAA_15
AAA_16
AAA_23
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
ABG57794
UniProt:
A0A6N4SNE6
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All DBs
Position
complement(584777..586615)
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AA seq
612 aa
AA seq
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MKTFNRILAFAKPYPRFAVPYFIFAMASTLFGLVNFAFLMPILDLLFNATKSLENLTKPV
PGFNIDYFKGILDYYTASLIQEYGKSTTLIFIALFLISTNFLTNIFKYFSQLINTRLRAT
VIYNMRERMFDKVVKLDVGYFTNQRKGDLMSRMTNDLGEIENSVIGALQVFFRDPFNLVI
YFITLLMIQWELMLFTLLILPIAGLGVSIIGKKLKKESEESQRSVGHILSLIDESISGIR
IIKGFIAEKFVINRFNDQGKKYADLTNSMGNKRELASPLTEFMGVTIVAIILYIGGNLVF
SGKMEASTFFLFIICFYKILEPVKSLASSITSIQRGIAAGDRIFDILDHPVSIEDTPSAK
TLSAFTTGVSLKNIGFKYEEHEVLKHISIDIPKGKLIALVGPSGGGKSTLVDLIPRFYDP
ATGSVEIDGVNIKDYTLNSLRSYIGIVTQESILFNDTIFNNIAFGLPNITQEDVERAARI
ANAHEFIIRTEKGYQTSIGERGSKLSGGQRQRLSIARAVLKNPDILILDEATSALDNESE
KLVQEALNYLMKDRTSIVIAHRLSTIRHADMILVLDKGQIKEQGTHEQLLAQEGIYYKLH
QHASETGGMIIE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatttaaccgaatactcgcgtttgccaagccttatccaaggtttgccgttccc
tattttattttcgcaatggcttccaccctctttggcctggtgaactttgcattcttaatg
cccattctggacttattattcaatgcaacaaaatccctggaaaatttaacgaaaccggta
ccaggttttaatattgattatttcaaaggtattctggattattacaccgcatccttgatt
caggaatatggcaaaagtacaacgttgatattcattgcgctttttctgatcagtacaaat
tttcttaccaacatctttaaatatttttcgcagctcatcaatacccgtttgcgtgcaacg
gttatttataacatgcgcgaacgtatgtttgataaggtagtgaagctggatgtaggttat
tttaccaatcagcgcaaaggcgatctgatgtcgcgtatgacaaatgatttaggtgaaata
gaaaactccgtgatcggtgccttacaggtatttttcagagatccgttcaacctggttatt
tattttattacgctgttaatgatccagtgggaattaatgctttttacgctgctgatcctg
ccaatagcaggtttgggcgtttccatcattggtaaaaaattaaaaaaagaatccgaagaa
agtcaacgctccgttgggcatatcctgtcgctgatcgatgaatccattagtggcattcgt
atcatcaaaggatttattgccgaaaaatttgtcattaatcggtttaatgatcaggggaaa
aaatatgcagatctgacaaactccatgggtaataaaagagaacttgcttctccgttaaca
gaattcatgggcgttaccatcgttgcgatcatcttatatatcggaggcaatcttgtattc
tccggaaaaatggaagcaagtacctttttcttatttattatctgcttctacaaaatactt
gaaccggtaaaaagtcttgcctcttccattacatccatccagcgcggcattgcagccggc
gaccggatttttgacatcctggatcatccggtatctattgaggatactccatcggcaaaa
acactctctgcattcactacgggtgtaagcctgaagaacattggctttaaatatgaagaa
catgaagtattgaaacatatttccattgacataccaaaaggaaaattgattgcacttgtg
ggaccaagcggcggcggtaaatctaccttagtcgacctcattccgagattctatgacccg
gcaacaggcagcgtagaaattgacggtgtcaatatcaaagactatacactgaattcctta
cgttcgtacattggtattgtaacgcaggaatcgattttatttaacgatactatttttaac
aacattgcttttggtctgccgaacattacacaggaagatgttgaacgcgcagcacgtatt
gccaatgcgcatgaatttatcatccgtaccgaaaagggatatcagacttctatcggcgag
cgcggttctaaattatcaggcggacagcgtcagcgtttaagcattgcccgtgcggtatta
aaaaatccggacatcttaattttagatgaagcaacatctgcccttgataatgaatctgaa
aaactggtacaggaagcattaaattatttaatgaaagaccgtacgtccattgttattgca
caccgtttaagcaccatccgtcacgccgatatgatccttgtactggacaaaggccagatc
aaagaacaaggcacccacgaacaattgctggcgcaggaaggcatctattacaaattacac
cagcacgccagcgaaaccggcggcatgatcatcgaataa
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