Cytophaga hutchinsonii: CHU_0940
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Entry
CHU_0940 CDS
T00385
Symbol
ycdC
Name
(GenBank) transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chu03000
]
CHU_0940 (ycdC)
Transcription factors [BR:
chu03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CHU_0940 (ycdC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_N
CCPG1_C
TetR_C_17
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
ABG58219
UniProt:
A0A6N4SPM4
LinkDB
All DBs
Position
complement(1088091..1088723)
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AA seq
210 aa
AA seq
DB search
MTDNKIKNEDGKLELIINAAQKRFAHYGLCKTTMNEIASDVGMGKASLYYYFPDKETLFE
AVIKKEQNVFFDEMDKILNSGIDATALLKKYVKLRSLHFRHLLNLSKLRSDFFHNTKPVF
AKAFESFKQKEVEIVAGIIQYGITTKEFKRGNKHENAEFLVHLLLGVRMVKLKYKEINDF
DESDYEDLDKNMCKVAGMFLKEIQTEVASR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaataaaataaaaaacgaagacggcaagctcgaacttattattaatgcggct
caaaaacgctttgctcattatggtttatgcaaaacaaccatgaatgaaattgcgtctgat
gttggcatgggtaaagcctctttatattattatttccctgataaagaaacgttattcgaa
gctgtcattaagaaggaacagaatgttttttttgatgaaatggataaaattcttaattca
gggatcgatgcaactgcattattaaaaaagtatgttaaactacgaagtttacacttccgt
catttattaaacttatcaaaattgcgatctgacttttttcacaataccaagccggttttc
gccaaagcttttgaaagctttaagcaaaaagaagtggagatcgttgcaggcatcatacaa
tatggtattactacaaaagaatttaaacgtgggaataaacatgaaaatgcagagttcctt
gtacacctgttattaggtgtcagaatggttaaattgaagtataaagaaatcaatgatttt
gacgaatccgattacgaagaccttgacaaaaatatgtgtaaagtagccggtatgttttta
aaagaaatacaaacagaagtagcatccagataa
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