Cytophaga hutchinsonii: CHU_0948
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Entry
CHU_0948 CDS
T00385
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chu03016
]
CHU_0948 (truB)
Enzymes [BR:
chu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHU_0948 (truB)
Transfer RNA biogenesis [BR:
chu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHU_0948 (truB)
Prokaryotic type
CHU_0948 (truB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3660
Motif
Other DBs
NCBI-ProteinID:
ABG58225
UniProt:
A0A6N4SPH1
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All DBs
Position
complement(1097182..1097859)
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AA seq
225 aa
AA seq
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MPTNESPQHDLVLCLDKPYHWTSFDVVKKVRRVLKMKKVGHAGTLDPLATGLLIVCTGKK
TKTIESLMADEKEYSGAIGLGATTASYDLELPLENHTDISGLTETQIRKTVKQFLGTITQ
IPPIHSAVKVDGKRAYDEARKGNEVIIKSRQVFIKEFKITKVELPLVYFNIVCSKGTYIR
TIANDFGKALGCGGHLNALRRERIGTLSVKQALTPEQLEEKFLSI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcctacgaatgaatccccccagcacgatttagtattgtgcttagataagccttatcac
tggacctcctttgatgtggtaaaaaaagtacgtagagttttaaaaatgaaaaaggttggt
catgcgggcacgcttgatccactggctaccggcttgctgattgtttgtaccggaaaaaaa
acaaaaacaattgaatcgctgatggccgatgaaaaagaatattcaggtgctattggttta
ggtgcaactactgcatcatacgatctggaattgcctttagaaaaccataccgatatttca
gggttgaccgagacacagatccggaaaacggtgaaacaatttttaggtaccattacacag
atcccgcctattcattctgcggttaaagtagatggaaaaagagcgtacgacgaagcacgc
aaaggcaatgaagtgatcattaaatcgaggcaggttttcattaaagaattcaaaattaca
aaagtagaattacccttagtgtatttcaatattgtttgcagcaaaggcacatacatacgt
accattgcaaacgattttggaaaagcattaggctgcggcggccacctgaatgccttacgc
agagagcgcatcggaaccctttctgtaaaacaggcattaactccggaacaacttgaagaa
aaatttttgtcgatatga
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