Cytophaga hutchinsonii: CHU_1162
Help
Entry
CHU_1162 CDS
T00385
Name
(GenBank) CHU large protein; candidate pectate lyase, polysaccharide lyase family 1 protein
Organism
chu
Cytophaga hutchinsonii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_7
Pectate_lyase_4
PKD
Y_Y_Y
Por_Secre_tail
Pectate_lyase_5
PKD_4
Big_7
Motif
Other DBs
NCBI-ProteinID:
ABG58437
UniProt:
A0A6N4SQ18
LinkDB
All DBs
Position
complement(1341461..1344436)
Genome browser
AA seq
991 aa
AA seq
DB search
MKHVYLVLFSILSIVFVQAQDKCAPVGWATQNGGVTGGGSATPTVVTTYAALKTALTSTS
VKVVHVSGTITFPTNGRITIQDTDGKTIIGLAGSRMISVDKTKDGSGIMYIKRSKNFIMR
NLTFEGPGAYDTDGNDNLTIDACTNFWVDHCDFQDGMDGNFDIKNASDYISVTWCKFSYI
KAPIPNGPGGSDDHRYTNLIGSSDGATGDAGKLRVTFQYCWWGQGCVERMPRVRFGKIHL
ANNLYNSTVSNNVIRAGYKADLLIESNVFIGVNKPIDLFENDFTAVTARNNIFTNTSGNT
AGSGTSFTPPYTLTVAPANTVQALVTNTACGSGATLDSPTQCGCGTTPVNNNPTATLSAP
ANGASGCIGTAITLTASAQDSDGTIQKVDFYNGTALLGSDNTSPYSITYTPTAAGTLSIK
ATATDNAGGTGTSATNTVTVSALPTASVSSSTTNLCPSGSVVLTATTGASYKWFRGTEQV
GTAATYTAAEAGAYTVEVTNAAGCKATSAARTLTGTLQATPTITASATSFCAGGSAVLTA
SSGASYKWYRGTAPVGTAASLTVTEAGAYTVEVTNASGCKATSAVTQIAVNTATIPTVTA
SSTSFCAGGSAVLTASSGASYKWYRGTAPVGTAASLTVTEAGAYTVEVTNASGCKATSAV
TQIAVNTATIPTVTASSTSFCAGGSAVLTASSGASYKWYRGTAPVGTAASLTVTEAGAYT
VEVTNASGCKATSAVTQIGVNTATIPTVTASSTSFCTGGSAVLTASSGASYKWYRGTVPV
GTAASLTVTEAGAYTVEVTNASGCKAASSVTQINTTQQTVWYADADNDGKGDAASTLLSC
TKPQGYVSVSGDACPADPGKTAAGNCGCGNTEASCLDCSGTPNGTAFYDNCSICVGGNTE
KTACVTTATINGTNTNIKVVPQPFDVHTSISIENLGMIQSITIINSAGTVVETTQQINAP
YITVGESLASGLYTVLIHVEQGVYTTKIVKK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatgtctatttagtactattcagtatactgagcattgtatttgtacaggcacag
gataaatgtgcgcccgtgggctgggccacacaaaacggaggtgtaacgggcggcggctct
gccacacctacagttgttacaacctatgcggcgttaaagactgcacttaccagcacttct
gtaaaagtagtacatgtatccggaacgattacctttccaaccaacggacgcattaccata
caggataccgatggaaaaaccattatcggtttagcgggttcacgtatgatctcggttgat
aaaaccaaagacggttcaggaattatgtacatcaaacggtctaaaaatttcatcatgcgg
aatttaacgtttgaaggtccgggggcctacgacacagatggtaacgataaccttactata
gatgcctgtacaaatttctgggtagaccactgcgattttcaggatggtatggatggaaat
ttcgacattaaaaatgcttcggattatatttcagtaacgtggtgcaaattcagctatata
aaagcccctataccaaacggaccgggaggttcggatgatcaccggtacacaaacctgatc
ggcagttcagacggcgccaccggtgatgcaggcaaactgcgtgttactttccagtactgc
tggtggggacagggatgtgtagaacgtatgccgcgtgtacggttcggtaaaatacacctt
gcaaacaatctgtataacagcaccgtttcaaacaacgttatccgcgcgggctataaagca
gacctgctgatagaaagcaatgtttttatcggtgtgaacaagccgattgatctgtttgaa
aatgatttcacggcggtaaccgcacgcaacaacatctttacaaatacaagcggcaataca
gccggaagcggtacatccttcactcctccctacacgctgacagttgcaccagcaaatacg
gtgcaggcactggtaacaaacactgcctgcggttcgggcgcaacgctggacagccctacg
caatgcggctgcggaacaacacctgtaaacaataaccccacagcaacactttctgctcct
gccaatggcgcttcaggctgtataggaacggcaattaccctgacagcttctgcacaggac
agcgatggtaccattcagaaagtagatttttacaacggcactgccttgcttggttcagac
aatacatctccctactcgattacctatacgccaacagcggcaggtaccttatccatcaaa
gctactgctacagacaatgcgggcggtaccggcacgtctgcaaccaacacagtaacggta
tctgcattaccaacggcaagcgtttcttcttcaaccaccaatctgtgtccgtctggttct
gttgtgctgacagccactacaggcgcttcgtacaaatggttcagagggacagaacaagtg
ggaaccgcagcaacgtacaccgctgccgaagccggtgcctataccgtagaagtaaccaat
gcggcaggctgtaaagcaacttctgcagccagaacacttacagggacacttcaggcaacc
ccaacgataacagcatcagctacgtcattctgcgcaggcggttcagctgtattaacagcc
agcagcggcgcttcgtacaaatggtacagaggaacagcaccggtgggtacagcagcatcc
ttaaccgttacagaagcaggtgcctataccgtagaagtaacgaatgcttccggatgcaaa
gcaacatcggctgtaacacaaatcgctgtgaataccgcaacaataccaacggtaacggct
tcatcgacttcattctgcgcaggcggttcagctgtattaacagccagcagcggcgcttcg
tacaaatggtacagaggaacagcaccggtgggtacagcagcatccttaaccgttacagaa
gcaggtgcctatactgtagaagtaacgaatgcttccgggtgtaaagcaacatcggctgta
acacaaatcgctgtgaataccgcaacaataccaacggtaaccgcttcatccacttcattc
tgcgcaggcggttcagctgtattaacagccagcagcggcgcatcgtacaaatggtacaga
ggaacagcaccggtgggtacagcagcatccttaaccgttacagaagcaggtgcctatact
gtagaagtaacgaatgcttccgggtgtaaagcaacatcggctgtaacacaaatcggtgtg
aataccgcaacaataccaacggtaacggcttcatcgacttcattctgtacaggcggttca
gctgtattaacagccagcagcggcgcttcgtacaaatggtacagaggaacagtaccggtt
ggtacagcagcatccttaaccgttacagaagcaggtgcctataccgtagaagtaacgaat
gcttccggatgcaaagccgcctcttccgttacgcagatcaacacaacacagcaaactgtc
tggtatgcagacgctgataacgatggcaaaggcgatgcagcttcaacgctgctttcctgt
acgaaaccacaagggtatgtttccgtatcgggagatgcctgcccggcagacccgggaaaa
acagctgcgggcaactgtggctgcggcaatacagaagcttcttgtctggattgttcggga
acaccgaacggaactgcattttacgataactgttccatctgtgtaggcggcaatactgaa
aaaacggcttgtgtaacaacggcaacaattaatggaacaaatacaaatattaaagttgtg
ccgcagccttttgatgtgcatacatctatatcaatagaaaatctgggcatgatccaatcc
atcacaatcataaacagtgcgggtacagttgttgaaacaactcagcagatcaatgcacca
tacatcaccgtgggtgaatcgcttgcatctggattatacaccgttcttattcatgttgaa
cagggtgtgtatacaacaaagattgtaaaaaaatag
DBGET
integrated database retrieval system
