Cytophaga hutchinsonii: CHU_1233
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Entry
CHU_1233 CDS
T00385
Symbol
dnaX
Name
(GenBank) DNA polymerase III, tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu03030
DNA replication
chu03430
Mismatch repair
chu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHU_1233 (dnaX)
03430 Mismatch repair
CHU_1233 (dnaX)
03440 Homologous recombination
CHU_1233 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_1233 (dnaX)
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_1233 (dnaX)
Enzymes [BR:
chu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHU_1233 (dnaX)
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHU_1233 (dnaX)
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHU_1233 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
RCF1-5-like_lid
DNA_pol3_gamma3
AAA_5
AAA_14
Rad17
AAA_30
AAA_18
TIP49
AAA_2
AAA_7
AAA_assoc_2
VapE-like_dom
DNA_pol3_delta_C
AAA_19
ResIII
RNA_helicase
Mg_chelatase
AAA_33
AAA_24
SRP54
nSTAND3
AAA_16
ABC_tran
AAA_lid_RFC1
TPS
SKI
Motif
Other DBs
NCBI-ProteinID:
ABG58506
UniProt:
A0A6N4SQB2
LinkDB
All DBs
Position
complement(1424714..1425859)
Genome browser
AA seq
381 aa
AA seq
DB search
MDNFIVSARKYRPATFDSVVGQSHITTTLKNAIKNNHLAQAFLFCGPRGVGKTTNARILA
KTINCTNITADIEACDECESCKSFNNNASFNIQELDAASNNSVDDIRNLVEQVRYPPQYG
KYKIYIIDEVHMLSTAAFNAFLKTLEEPPAYAIFILATTEKHKIIPTILSRCQIFDFNRI
QIKDIAEHLAGIAVKENIKAEKEALHLIAQKADGALRDALSMFDLIVTFSSDNTITYKCA
IDNLHILDYDYYFKLTDMLNTQDVANSLLTFDEILRQGFDGHNFIIGLSEHLRNLMVCKD
KATIALLEVSEEVKKRYEQQSSAVSISFLMSGLNIGNQCDLHYKGSKNQRLHVELALMKM
AFINQAISAPDLLEDLKKKVN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggataatttcattgtttcagcacgtaaatacagaccggcaacgtttgacagcgttgta
gggcaaagtcatattactacgactctgaagaatgctattaaaaacaatcaccttgctcag
gcatttttattctgcggtcccagaggggttggtaaaaccactaatgcgcgtattctggcc
aaaaccatcaactgtacaaacattacagcagatattgaagcctgcgacgaatgcgaatcg
tgcaagagttttaacaacaatgcctcgttcaatattcaggaattagatgctgcatccaac
aactcggtagatgatatccggaaccttgttgaacaggtgcgctatccgccgcaatacgga
aaatataaaatctatatcatagatgaggtccatatgctctctacggctgcgttcaacgca
ttcctgaagacgcttgaggagcctcctgcgtatgccattttcatcttagctactacggaa
aaacataagatcattccaacaattttatcgcgttgccagatcttcgatttcaaccgtatt
cagataaaagatattgccgaacacctggctggcattgctgtaaaagaaaatatcaaagct
gaaaaggaagccttacacctgatcgctcagaaagcggacggcgcattgcgtgacgcactt
tccatgtttgatctcatcgtaacattctcttcggacaataccattacctataaatgtgcg
attgataacctgcatattttagattacgattattacttcaagcttaccgacatgctgaat
acacaggatgttgccaacagcttacttacttttgacgagatcctgcgccagggttttgat
ggacacaattttatcattggcctgagcgaacatttacgcaacctgatggtatgcaaagac
aaagcaacgattgccttgctggaagtttcggaagaagttaagaaacgttatgagcaacag
tcatctgctgtaagtatcagctttttaatgtccggcctgaacatcggcaaccagtgtgac
ctgcattacaaaggaagcaaaaaccaacgtctgcacgttgaactggcgctgatgaaaatg
gccttcatcaatcaggcaatttccgctcctgacctgctggaagacctaaaaaaaaaagta
aattaa
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