Cytophaga hutchinsonii: CHU_1387
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Entry
CHU_1387 CDS
T00385
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase precursor
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu00541
Biosynthesis of various nucleotide sugars
chu01100
Metabolic pathways
chu01250
Biosynthesis of nucleotide sugars
Module
chu_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CHU_1387 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
chu01005
]
CHU_1387 (rfaD)
Enzymes [BR:
chu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
CHU_1387 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
chu01005
]
Core region
CHU_1387 (rfaD)
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ABG58658
UniProt:
A0A6N4SQL2
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Position
complement(1608201..1609166)
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AA seq
321 aa
AA seq
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MMVVTGAAGFIGSCLIQRLNELNFNFIVAVDHFENPEKKKNLENKKIQEYVDRDDFFDWL
DKNNKHVEFIFHIGARTDTTEFDKAIFDRLNVAYSKNMWNACIKYQIPLVYASSAATYGN
GEFGYDDNEQKIPQLKPLNPYGDSKNDFDIWALQQEKQPFFWAGLKFFNVYGPNEYHKSR
MASVIFHAFHQIKNSGKMKLFRSHKAEYTDGGQMRDFVYVKDVCNVIIFLMNHRKNSGIY
NLGSGTARTFLDLAKNTFKNMEVTENISFIDTPIDIRDKYQYFTEANMGKLKSIGYTDTF
HTLEEGIKDYVKNYLIPNKYW
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatggttgttacaggtgcggctggatttatcggaagctgcttaattcaacgcttaaat
gagttgaattttaattttatcgttgcagtagatcattttgaaaatcccgaaaagaaaaag
aatctggaaaataaaaagattcaggagtatgtggaccgtgatgattttttcgattggctg
gataaaaacaacaaacatgttgaattcatctttcatataggcgcacgcactgatacaact
gaattcgacaaagcaatctttgacagactgaatgttgcctattcaaaaaacatgtggaac
gcctgtatcaagtatcagataccccttgtctatgcttcttctgctgcaacgtatggtaat
ggtgagtttggctacgatgataatgagcagaaaatcccgcaattaaaaccattgaatcca
tatggtgattctaaaaatgattttgatatctgggcattacaacaggagaaacaaccattc
ttctgggcaggcttaaaattctttaacgtttacggaccgaatgaatatcataaaagcaga
atggcttcggtgatcttccatgcgtttcatcagataaaaaattccggaaagatgaaattg
ttccgttcacacaaagcagaatatacagatggcggacagatgcgtgactttgtgtatgtg
aaagatgtctgcaacgtaatcatcttcctgatgaatcaccgcaaaaacagcggcatctat
aacttaggaagcggtacagccagaacattccttgatcttgccaaaaatacgtttaaaaat
atggaggtaacggaaaatatttctttcattgatacgcccatagatatccgtgataaatat
caatactttacagaagccaatatgggcaaacttaaaagcattggctatacggatacattc
cataccctggaagaaggtattaaagattatgtaaaaaattacctgataccaaataaatac
tggtag
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