Cytophaga hutchinsonii: CHU_1396
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Entry
CHU_1396 CDS
T00385
Symbol
rnc
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chu03019
]
CHU_1396 (rnc)
03009 Ribosome biogenesis [BR:
chu03009
]
CHU_1396 (rnc)
03036 Chromosome and associated proteins [BR:
chu03036
]
CHU_1396 (rnc)
Enzymes [BR:
chu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CHU_1396 (rnc)
Messenger RNA biogenesis [BR:
chu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHU_1396 (rnc)
Ribosome biogenesis [BR:
chu03009
]
Eukaryotic type
90S particles
RNase
CHU_1396 (rnc)
Prokaryotic type
rRNA processing factors
CHU_1396 (rnc)
Chromosome and associated proteins [BR:
chu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CHU_1396 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ABG58667
UniProt:
A0A6N4SQW0
LinkDB
All DBs
Position
complement(1619682..1620425)
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AA seq
247 aa
AA seq
DB search
MFLLEKQLNILRNFFRKKEDKILAQKIRYVTGMWPGNLHLYQMAIVHTSAADENESGVKE
SYERLEYLGDSILGAVVAEYLFKRFPFKDEGFLTEIRSRIVNREILNQVGKDLGLSDIVV
FNGSKGKQGHKSLYGDVVEAIVGAVYLDKGFENAKKFVLKKIVSSQIDVDAIIQNNKNFK
SILLEWCQKENKKLEFVIIEESGHRHQKVFKAEVRVADESKGQGIGFSKKKAEQNAAEIA
CIELDLK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgttcttgctagaaaagcaactcaatattctacgtaacttctttcgaaaaaaagaggac
aagatcctcgctcaaaaaatcagatacgttaccggtatgtggcctggaaacctgcatctg
tatcaaatggcaattgtacatacttctgccgctgatgaaaatgagtctggtgtaaaagaa
tcgtacgaacgtttagaatatttaggtgattccattctgggtgccgtagttgctgaatat
cttttcaagcgtttcccctttaaagatgaaggttttttaactgaaatcagaagccggatc
gtgaacagagaaattctgaaccaggtaggcaaagatcttggtctctcagacattgtggtt
tttaacggaagtaaaggaaagcaaggccataaatcgctttatggcgatgtggtagaagct
attgttggcgcggtatacctcgataaaggatttgaaaatgcgaagaaattcgttttgaaa
aaaattgtttcttctcaaattgatgtcgacgccattattcaaaacaataaaaacttcaag
agtattttattggaatggtgccaaaaggaaaataaaaaacttgagtttgtgatcatagaa
gaaagcggacacaggcaccaaaaagtatttaaagctgaagtgcgtgttgccgatgaaagc
aaaggtcaaggcattggtttcagtaagaaaaaagcagaacaaaacgccgctgaaatagcc
tgtatcgaattggatttaaaataa
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