Cytophaga hutchinsonii: CHU_1585
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Entry
CHU_1585 CDS
T00385
Name
(GenBank) outer membrane protein, OmpA family
KO
K03286
OmpA-OmpF porin, OOP family
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chu02000
]
CHU_1585
Transporters [BR:
chu02000
]
Other transporters
Pores ion channels [TC:
1
]
CHU_1585
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
PD40
DUF748
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ABG58855
UniProt:
A0A6N4SR46
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All DBs
Position
complement(1859047..1860600)
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AA seq
517 aa
AA seq
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MKRYYLVFILSIVAQLVFAQDSIRQNLGPNINTEYDEIGPIITPDGKTLYYVIESHPSNT
KSNYYNDAEDIWYSEKDASGKWGKAKRMSKPFNTRRYNSIECISTDGNIVYIRGAYEKGE
YTGSGFSYSIKTTTGWSDPQEMNIQDFSKMSKGNYSSLWVCPDGKTLIISFSKYADNKKY
TSRTKINDIYVCFKTGPNQWAAPVPIKSINTKNYTESTPFVASDNTTLYFSSDRPGGKGD
RDIWMSKRLDDTWLKWSEPVNLDSNINTSGWDAYYTLDARGEFAYMVSDRSGYGQSDIVR
IKLTASNRPNPVVLISGRVINAKTNQPVSARITYQSLKTGKEIGQAISDPVTGNYKMTLP
YGNQYSFSAQGGNFIPVFNNLDLTTVAEYQEVKQDLYLVPVEIGQTVQLNNIFFDVSKST
LRQESYAELDRLYLILQNNPVMEIEIDGHTDNVGDPIINMQLSNDRANAVKDYLLKKGIA
PGRIVTKGFGGTKPIVSNDTEELKKLNRRVEFTILKL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggtattatttggtatttattttaagcatagttgctcagcttgtttttgctcag
gattctatccgtcaaaatttaggccccaatatcaatactgaatacgatgaaataggcccc
atcattacacccgatggtaaaaccttatactacgttattgaaagtcacccttccaataca
aaatcgaattattacaatgatgccgaggatatctggtattcagaaaaggatgcttcagga
aaatggggaaaggcgaaacgcatgtctaaaccttttaatacccgtcgttataatagcatt
gaatgcataagcaccgatggcaacattgtatacatcaggggagcgtatgaaaaaggtgaa
tatacaggcagtggtttttcgtattccataaaaacaacaacaggctggagcgatccgcag
gaaatgaacattcaggatttttctaaaatgagcaaaggaaattattcttctttgtgggta
tgcccggatggtaaaacgcttatcatatctttttcaaaatacgcagacaacaaaaaatat
acttccagaacaaagataaatgacatttatgtttgttttaaaacaggccccaatcagtgg
gctgcacccgttccgataaaatccattaacacaaaaaattatacggagtctactccattt
gttgcctctgacaatacaactttatacttctcttctgatcgtccgggaggcaaaggtgat
cgggatatctggatgtcaaaacgtctggatgacacatggcttaaatggtctgaaccggta
aacctcgattcaaatataaatacttcaggatgggatgcatattatacgttagatgcgcga
ggtgaatttgcatatatggtttccgacagatccggttatggacaaagtgatattgtacgc
attaagttaacagcatcaaacagaccaaaccctgttgtgttgatcagcggaagagtcatt
aatgcaaagaccaatcaaccggtttctgcacgcattacctatcagtctttaaaaacaggt
aaagaaatcggacaggcaatttcagaccctgtaacaggtaattataaaatgactctgccg
tatggaaaccaatatagctttagtgcacaaggcggtaatttcattcccgtatttaataat
ctcgaccttacaaccgttgcagaatatcaggaagtaaaacaggatctttatcttgttccg
gttgaaattgggcaaaccgtgcaactgaataatattttctttgatgtcagtaaatctacc
ttaagacaagaatcgtatgcagaactggatcgcttgtatctgattctgcagaataatccg
gtaatggaaattgaaattgacgggcacacggataatgttggcgacccgatcattaatatg
caattatcaaatgaccgtgcgaatgcggtaaaagattatttactaaaaaaaggcattgca
cccggacgtattgttaccaaaggttttggaggaacaaaaccaattgtgagcaacgataca
gaagaattaaaaaaactgaacagacgtgttgagtttaccattttaaaattgtaa
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