Cytophaga hutchinsonii: CHU_1680
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Entry
CHU_1680 CDS
T00385
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chu
Cytophaga hutchinsonii
Pathway
chu03030
DNA replication
chu03430
Mismatch repair
chu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHU_1680 (dnaQ)
03430 Mismatch repair
CHU_1680 (dnaQ)
03440 Homologous recombination
CHU_1680 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_1680 (dnaQ)
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_1680 (dnaQ)
Enzymes [BR:
chu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHU_1680 (dnaQ)
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHU_1680 (dnaQ)
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHU_1680 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
GIY-YIG
GIY_YIG_2
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ABG58948
UniProt:
A0A6N4SRH7
LinkDB
All DBs
Position
1967687..1969036
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AA seq
449 aa
AA seq
DB search
MMYSIIDIETTGGHASGNRIIEIAIYKFDGEKITDTYQTLINPERRIPVFITSLTGIDTE
MVADAPVFADVAREITDFTRDSVFVAHNVNFDYTFVKKELQALNMPYNLPKLCTVRLSRK
IFPGLPSYSLGNLCGSLGIDVQNRHRAAGDAEATVRLLNKLLLNDTEGFIPKSLKKNSKE
TLLPANLPREQFDALPETFGVYYFHDHKGKVIYVGKANNIKKRVISHFSGKQQNQKSQQF
MQAIYGLSYEVCGSELLSLLLESHEIKKYFPVYNSIQKFGEKNYGIYQYEDNAGFIRLSI
AKVNKLQHPLISFRYISEARTFLLEKVRTFQLCHRRSGLQTAPCSDVELCTACKGTTRST
AYNVKMKRALATFEHPDHSYIIKQPGRTRDEYAVIVVEAGRYLGYAYIPADLSGSTIEEL
KPFVNRHPDNRDIQKILAMHQRKSMVIAV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattcgatcattgatattgaaacaaccggcggacatgcttcgggaaaccggatc
attgagattgcaatctataagtttgatggagaaaaaataaccgatacttatcagacgctg
atcaatccggagcgtcgcattcctgtatttataacttccttaacaggcattgatactgaa
atggtagccgatgccccggtctttgcagatgttgcacgggaaatcacagactttaccaga
gacagtgtttttgttgcacataatgtcaatttcgattatacgttcgtaaagaaagaactg
caggcacttaacatgccatacaatctgccgaaactgtgtaccgttcgtttgagccggaaa
attttccccggactaccctcctacagtcttggtaatctatgcggcagcctgggtattgat
gtacagaacagacaccgcgcggcaggtgatgcagaagcaacggtgaggcttctgaataaa
ctattattaaatgatacagaaggatttataccaaagtctttaaagaaaaattcgaaggaa
acgttactgcctgcaaacctgccgcgcgagcagtttgatgcactgccggaaacgtttggt
gtgtattattttcacgatcataaaggcaaagtgatctatgtaggcaaagccaataacatc
aaaaaacgtgtcatcagccacttttccggcaaacagcagaatcagaaaagccagcagttt
atgcaggccatatacggactgagttatgaagtatgcggcagcgagttattgtctttgctg
ctggaatcccatgagatcaaaaaatatttcccggtctataacagcattcagaaattcggc
gaaaagaattacggcatttatcagtatgaagataatgccggtttcatccgcttatccatc
gccaaagtaaacaaacttcagcacccgcttatttctttcagatacatcagcgaagcacgt
acatttctgttggaaaaagtgcgcacgtttcaattgtgtcaccgccgcagcggtttacag
actgctccctgttcagacgttgaattgtgtaccgcctgtaaaggcacaacaagaagcacc
gcgtataatgtaaagatgaaacgcgccctggcaacgtttgagcatccggatcacagttac
atcattaaacagccgggccgcacacgagatgaatatgcggtaattgttgttgaagcaggc
cgttacctgggctatgcctacataccagctgatctgtcaggatcaactattgaggaactg
aaaccttttgttaaccgccatccggataaccgcgacatccagaagattttagccatgcat
caacggaaaagtatggttattgctgtttag
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