KEGG   Cytophaga hutchinsonii: CHU_1785
Entry
CHU_1785          CDS       T00385                                 
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
chu  Cytophaga hutchinsonii
Pathway
chu02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:chu00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CHU_1785 (rpoD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chu03021]
    CHU_1785 (rpoD)
Transcription machinery [BR:chu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CHU_1785 (rpoD)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r1_2 Sigma70_r3 UPF0122 Sigma70_r4_2 Scm3 HTH_28
Other DBs
NCBI-ProteinID: ABG59052
UniProt: A0A6N4SRP9
LinkDB
Position
complement(2093042..2093905)
AA seq 287 aa
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVDLAKRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPDELAEVLEVSTAEVVDTLKISGRHV
SMDAPFVQGEENSLLDVLENSSESAPDSSLMNDSLRREVQRALSTLTQREADVISLYFGL
NGEHSMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq 864 nt   +upstreamnt  +downstreamnt
atgagacagctaaagattagtaaacagataaccaacagagagagtcaatctctggacaag
tatttacaggaaatcgggaaagtagatttgcttaccccggatgaagaagtagatcttgcg
aaacgtattcgcgaaggtgatcagttagcattagaaaaattaacaaaagccaacctgcgt
ttcgtcgtttcggttgcaaaacaataccaaaaccagggtttatctctgggggatttaatt
aatgaaggaaacttaggtttgatcaaagcggctcaacgttttgacgaaacccgtggtttc
aaatttatctcttatgctgtatggtggatccgtcagtcaattctgcaggcattagctgag
cagtcacgtattgtgcgtttaccattgaacagagtaggttcattaaacaagatctctaaa
acattctctgaactggaacaaaaatatgaaagagagccgtctccggacgaacttgctgaa
gtattggaagtttctacagcagaggttgttgatacacttaaaatttcaggtcgtcacgta
tctatggatgcaccttttgtacaaggtgaagaaaacagtttattagatgtacttgaaaac
agcagcgaatcagctcctgattcaagtttaatgaatgattcgttaagaagagaagtacaa
cgtgctttatctacactaactcaacgtgaagcagatgtaatttctctttactttggttta
aatggcgaacattctatgacgcttgaagagatcggtgaaaagtttaatttaacaagagaa
cgtgttcgtcagatcaaagaaaaagcaattcgtcgtttaagacatacctcaagaagtaaa
gcattgaaaccttatttaggataa

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