Cytophaga hutchinsonii: CHU_1785
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Entry
CHU_1785 CDS
T00385
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03086
RNA polymerase primary sigma factor
Organism
chu
Cytophaga hutchinsonii
Pathway
chu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHU_1785 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chu03021
]
CHU_1785 (rpoD)
Transcription machinery [BR:
chu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHU_1785 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r3
UPF0122
Sigma70_r4_2
Scm3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABG59052
UniProt:
A0A6N4SRP9
LinkDB
All DBs
Position
complement(2093042..2093905)
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AA seq
287 aa
AA seq
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MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVDLAKRIREGDQLALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPDELAEVLEVSTAEVVDTLKISGRHV
SMDAPFVQGEENSLLDVLENSSESAPDSSLMNDSLRREVQRALSTLTQREADVISLYFGL
NGEHSMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctaaagattagtaaacagataaccaacagagagagtcaatctctggacaag
tatttacaggaaatcgggaaagtagatttgcttaccccggatgaagaagtagatcttgcg
aaacgtattcgcgaaggtgatcagttagcattagaaaaattaacaaaagccaacctgcgt
ttcgtcgtttcggttgcaaaacaataccaaaaccagggtttatctctgggggatttaatt
aatgaaggaaacttaggtttgatcaaagcggctcaacgttttgacgaaacccgtggtttc
aaatttatctcttatgctgtatggtggatccgtcagtcaattctgcaggcattagctgag
cagtcacgtattgtgcgtttaccattgaacagagtaggttcattaaacaagatctctaaa
acattctctgaactggaacaaaaatatgaaagagagccgtctccggacgaacttgctgaa
gtattggaagtttctacagcagaggttgttgatacacttaaaatttcaggtcgtcacgta
tctatggatgcaccttttgtacaaggtgaagaaaacagtttattagatgtacttgaaaac
agcagcgaatcagctcctgattcaagtttaatgaatgattcgttaagaagagaagtacaa
cgtgctttatctacactaactcaacgtgaagcagatgtaatttctctttactttggttta
aatggcgaacattctatgacgcttgaagagatcggtgaaaagtttaatttaacaagagaa
cgtgttcgtcagatcaaagaaaaagcaattcgtcgtttaagacatacctcaagaagtaaa
gcattgaaaccttatttaggataa
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