Cytophaga hutchinsonii: CHU_1914
Help
Entry
CHU_1914 CDS
T00385
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chu03016
]
CHU_1914
Enzymes [BR:
chu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
CHU_1914
Transfer RNA biogenesis [BR:
chu03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
CHU_1914
Prokaryotic type
CHU_1914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
ABG59180
UniProt:
Q11TT4
LinkDB
All DBs
Position
2245953..2246894
Genome browser
AA seq
313 aa
AA seq
DB search
MDFELFILGSSSATPSKGRYQSAQLLKIHNDYFMIDCGEAAQYQLSRYKLNHTKISHIFI
SHLHGDHFFGLVGLLSTMNLYGRKNPIHVFGPPGLDEIIQIQLKYSETLLQFPLHYTTLE
NEGSEHILDHPLVDVYTIPLEHRIRCNGFLFKEKPKSYKLNKSKLPEDLSLLEIAQLKQG
IDVYDENGNVKALVREICMPALKSRSYAYCSDTKVNEQYFPYIKGVDLLYHESTFLDELA
DRAAKTYHTTAKQAAQVAKEAEAGKLIIGHFSSRYYDTEPFLLEASSIFKHTYLGTEGSS
FYVSDRISHEDNS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaactattcattttaggttcaagttcggcaacgccgtcaaagggccgatat
cagtcggcccaactattaaaaatacacaacgattattttatgattgattgtggtgaagcg
gcacaatatcaattaagccggtataaactgaaccacacaaaaatcagtcatatctttata
agccatttgcatggcgatcatttttttggcttggttggcctgttaagtaccatgaatctg
tatggaagaaaaaatcccatacacgtattcggccctccgggtttggatgagatcattcag
atacagctgaaatattctgaaacgcttctgcaatttcccctgcattatacaacactggaa
aatgaaggaagtgaacacattctggatcatcccctggtagacgtatataccattccgctt
gaacaccggattcgctgtaatggttttttatttaaagaaaaaccaaaatcatacaaactc
aataaaagcaaattacctgaagatctcagcctgcttgaaattgcacagctaaagcagggc
atagatgtatacgatgaaaatgggaatgtaaaagcattggtacgtgaaatatgcatgcct
gcattaaaatcgcgcagctatgcctactgttcagatacgaaagtgaacgaacagtatttt
ccatacatcaaaggcgttgatctgctgtatcatgaaagtacctttctggatgaacttgca
gaccgggctgccaaaacatatcatacaactgctaaacaggccgcacaggtagctaaagaa
gccgaagcaggaaaattaattattggtcatttctcttcccggtattacgatacagaacca
tttctgctggaagccagttctatttttaaacacacctatctgggtacagaaggaagcagt
ttctatgtaagcgatcgtataagccatgaagacaactcttga
DBGET
integrated database retrieval system
