Cytophaga hutchinsonii: CHU_2291
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Entry
CHU_2291 CDS
T00385
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_2291
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_2291
Enzymes [BR:
chu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHU_2291
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Topoisomerases
CHU_2291
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHU_2291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Big_15
Motif
Other DBs
NCBI-ProteinID:
ABG59552
UniProt:
A0A6N4STC7
LinkDB
All DBs
Position
complement(2662094..2663140)
Genome browser
AA seq
348 aa
AA seq
DB search
MRKAVKDYQESAKLANLVYVNDKEEGIARKKNNGRFSYYLKDKKISDKKILQRINQLVIP
PAWENVWICQNENGHIQVTGVDAKNRKQYRYHPAWSNLRDQTKYCRLRDFSHALPEIRAR
IKEDLCQRGFPKNKVLAAVVSIMESTSIRVGNSMYEKLYGSYGLSTMKDRHVKIQGQEVQ
FSFKGKKGVYHKISLKSKKLAHIVSQCKDIPGKELFQYFDEKGNNHSIDSGDVNDYIREI
SGGDFTSKDFRTWTGTVKCLQAFSNLGHGENNTQVKRLMNEAMDIVAHQLGNTRSVCKKH
YIHPGILADYESGKLEKYIKQIQEIEMDCNSDAIITPTEKVLVKILEH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaagctgtgaaggactaccaggagagtgctaaattagcaaatcttgtatatgta
aatgataaagaagaaggtattgcacggaaaaaaaataatggaagattttcatattatttg
aaagacaaaaaaatatctgataaaaaaatattacaacgcatcaaccaattggttattccg
ccggcctgggaaaatgtatggatttgccaaaatgaaaacggacacattcaggtaacaggt
gttgatgctaaaaacagaaagcaatatcgttatcaccctgcatggtctaatctgcgcgat
cagacaaaatattgcaggctgcgtgatttctcgcatgcgcttcctgaaataagagcacgt
ataaaagaagatctatgccaacgtgggtttcctaaaaataaagttcttgctgctgttgta
agcatcatggagtctacaagtattcgtgtagggaatagcatgtatgaaaaactatatggt
tcatatggcttatcaacaatgaaagacaggcatgttaaaatccagggccaggaagttcaa
ttttcgttcaaagggaaaaaaggtgtttaccataaaataagtttgaaaagtaaaaaactg
gcacatattgtctctcaatgtaaagacattcccggtaaggaattgttccagtactttgat
gaaaagggaaacaatcattccattgattcaggagatgtaaacgattacatacgtgaaata
tcgggtggtgattttacaagcaaagatttccgtacctggaccggaacagtaaaatgcctg
caggcattttcaaacctgggtcacggtgaaaataacacacaagtaaaaaggttgatgaat
gaagcaatggatattgtagcacatcaattagggaatacacgcagtgtttgtaaaaaacat
tatattcatcccgggatcctggctgattatgaaagcgggaaactggaaaaatacattaag
cagattcaggaaattgaaatggattgtaattccgatgcaatcattacaccgacagaaaaa
gtactggtaaaaattcttgaacattaa
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