Cytophaga hutchinsonii: CHU_2343
Help
Entry
CHU_2343 CDS
T00385
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_2343 (topA)
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_2343 (topA)
Enzymes [BR:
chu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHU_2343 (topA)
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Topoisomerases
CHU_2343 (topA)
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHU_2343 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
SBP_bac_3
Rho_N
Motif
Other DBs
NCBI-ProteinID:
ABG59601
UniProt:
A0A6N4ST95
LinkDB
All DBs
Position
2704706..2707231
Genome browser
AA seq
841 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEGYLGKDFTVKSSYGHVRDLQKGDKAIDIANNFTPTYEVSPDK
KDVVKELKKLAKEAEMVWLATDDDREGEAISWHLKESLDLDDKKTRRIVFREITKNAILN
AVQTPRGIDIDLVNAQQARRILDRLVGFEMSPVLWKKIKAGLSAGRVQSVAVRIVVDRER
EVDQFNATALFKVTAEFKDGTKTIKAELPNRFETEAEAQAFLDKLVGADFFVRDLEKKPA
KKSPSAPFTTSTLQQEASRKLSFSVAQTMTVAQRLYEAGKISYMRTDSVNLSDFAIDAAR
TTITTNYGGEYAFTRKYKSKSENAQEAHEAIRPTDFNVQQASSDRNEQRLYDLIWKRAIA
SQMADAKLERTVVTIGNNKGPENFIATGEVITFEGFLKVYLESKDEEDEDEEEIEAKTGG
TATLPPLTVNQKLGLNQIVAVERYTRPPSRYTEASLVKKLEEMGIGRPSTYAPTISTIQK
RGYVIKEDRDGRERKLKQLTLKDNAVKAAVITENTGQEKSKLFPTDLAMITNDFLVEHFP
RVTDFNFTAMVEKEFDDIAEGKIKWQSMLKGFYGDFHEQVLKTENIDRSTVNTSRILGTH
PETGEQISTRLGRYGPFVQIGEADEEKGIKPKYASLRKGQLIENITLEEALELFKLPREL
GAFEDKPMVVAIGRFGPYIRHNSKFVSIPKIDDPMTISAERGIELILAKRVSDAEKLILE
FPESEYVKVLKGRWGPYLAIGKNNFKLPKDKEPASLTYAECLAIAGLDHDPTDVDAGLAK
AKKGKAAAKKTTTAKKTAVKKAAVKKPAAKKPAAKKAVAKKAAAKKPAAKKASAKKTTAK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaatttagtcatagttgagtcccctgcaaaggcaaaaaccattgaagggtat
cttggaaaagattttactgttaagtcgagttatggtcacgtaagagacttacagaaaggc
gataaggccatcgatatagcaaataattttacgcctacgtatgaggtttctcccgataaa
aaagatgtcgtaaaggaattaaagaagctagccaaggaagccgaaatggtttggttagca
accgatgatgaccgcgaaggagaagctatttcctggcatttaaaagaatcgctggatctg
gatgataaaaaaacaagacggattgtattccgtgagattacaaaaaatgccattttaaat
gccgtacaaacaccacgcggtatagatattgacttagtaaatgcacagcaggcacgccgt
atccttgaccgtcttgtaggctttgaaatgtcacctgtgctctggaagaaaatcaaagct
ggtttatcggctggccgggtacaatctgtagccgtgcgtattgtagttgacagagagcgt
gaagtggaccagttcaatgcaactgctttatttaaagtaacagcagaattcaaagatggt
actaaaacgatcaaagctgaactgccgaaccgttttgaaacagaagcagaagcgcaggca
tttttagataaactggttggtgcggatttctttgtacgtgacttagaaaaaaagccggcg
aaaaaatcaccttctgccccattcactacctctacattacagcaggaagcatcgcgcaag
cttagcttctccgtggcacagaccatgaccgttgcacagcgtttgtatgaagccggtaag
atctcttatatgagaacggattcggtaaacctgtcggactttgccattgatgccgcacgc
actactattacaactaactatggtggggaatacgcattcaccagaaaatataagagtaaa
tctgaaaatgcacaggaggcgcacgaagccatccgtccgacggatttcaacgtacagcag
gcaagttcagaccgcaacgaacaacgcttgtatgatctgatctggaaacgtgcaattgct
tctcagatggcagatgccaaattagaacgtaccgttgtaacaatcggtaataataaagga
ccggaaaattttattgcaaccggtgaagtgatcacctttgaaggtttcttaaaagtatac
ctggagtctaaagacgaagaggatgaagacgaagaagaaatcgaagcaaaaacaggtggt
acagcaactcttcctccattaaccgttaatcagaaattaggtctgaatcagatcgtggcg
gtagaacgttatacacgaccgccatcccgatatacagaagcaagccttgttaagaagctt
gaagaaatggggatcggccggccatctacgtatgcgccaacgatctcaaccattcagaaa
agaggatacgttattaaagaagaccgcgacggcagagagcgtaagctgaaacaactgaca
ttaaaagataatgcggttaaagcagctgttatcactgaaaataccggacaggaaaaatcg
aaactgtttccgaccgatcttgccatgatcaccaatgattttcttgtagaacattttccg
cgtgttacagacttcaattttaccgccatggtagaaaaagagtttgatgatattgctgaa
gggaagatcaaatggcaaagcatgctgaagggcttctatggcgacttccatgagcaggta
ttaaagacagaaaacattgaccgttctaccgtaaatacatcccgtatactgggtacacac
cctgaaacgggcgaacagatcagcacacggctgggtcggtatggtccgtttgtacagatt
ggtgaagccgacgaagaaaagggcatcaagccgaagtacgcgagtttacgcaaaggacaa
ctgattgaaaacattacgctggaagaagcgctggaattatttaaacttccaagagagctt
ggtgcgtttgaagacaaaccaatggtagtagcaatcggccgtttcggcccatatatccgc
cacaacagtaagtttgtttctattccgaagattgatgatccgatgacgatttctgcggaa
agaggcattgaacttattcttgcaaaacgtgtatcggatgcagagaagctgattcttgag
ttcccggaaagtgaatatgtaaaagtattaaaaggcagatggggcccctatctggcaatt
ggtaaaaataatttcaaattacccaaagacaaagaacctgcaagtttaacgtacgcggaa
tgccttgccattgcaggcttagaccacgaccctacagatgtggacgccggtttggcaaaa
gcaaagaaaggtaaagcagctgcaaagaaaacaactacagctaaaaaaacagcagtgaag
aaagcagcggtgaagaaaccggcagctaaaaaacctgcggctaaaaaagcagttgcgaag
aaagcggcagctaagaaacccgcagctaaaaaagcatcggctaaaaaaacaactgctaag
aaataa
DBGET
integrated database retrieval system
