Cytophaga hutchinsonii: CHU_2750
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Entry
CHU_2750 CDS
T00385
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_2750 (hupB)
03036 Chromosome and associated proteins [BR:
chu03036
]
CHU_2750 (hupB)
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_2750 (hupB)
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHU_2750 (hupB)
Chromosome and associated proteins [BR:
chu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHU_2750 (hupB)
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHU_2750 (hupB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Arteri_nsp7a
Motif
Other DBs
NCBI-ProteinID:
ABG60000
UniProt:
A0A6N4SUT5
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All DBs
Position
3135208..3135480
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AA seq
90 aa
AA seq
DB search
MNKAELIDAIAAESKLTKADSKRALDAFLNATGKALKKGESVVLIGFGSFKTATRAARNG
RNPQTGKVIKIKAKKVVKFKAGAELTKKVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagaattaatcgatgctatcgcagctgaatcaaaattaactaaagcagat
tctaaaagagctttagatgcatttcttaacgctactggtaaagcgcttaaaaaaggtgaa
tcagttgtattaattggtttcggttcttttaaaacagctacacgtgcagctcgtaacggt
agaaacccacaaactggtaaagtaattaaaatcaaagctaaaaaagtagttaaattcaaa
gctggtgctgaacttactaaaaaagttaagtaa
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