Cytophaga hutchinsonii: CHU_3480
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Entry
CHU_3480 CDS
T00385
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chu03009
]
CHU_3480 (rluD)
Enzymes [BR:
chu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CHU_3480 (rluD)
Ribosome biogenesis [BR:
chu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CHU_3480 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABG60714
UniProt:
A0A6N4SVZ8
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All DBs
Position
4027283..4028329
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AA seq
348 aa
AA seq
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MAENEIPEELEDGFSEDELFEHHRVVCDPGQSLMRIDKFLMSRIQYATRSRIQYGIEIDS
VKVNDKSTKASYKVRPGDVITISLPHPPREDVLIPEDIPLDIVYEDDQILIVNKKPGMVV
HPAHGNWTGTLVNALAYHFENLPTHVNGKIRPGLIHRIDKDTSGLLVIAKTDYAMTFMAK
QFADHSIERTYYAICWGVPDPKSGTIKNYLGRSTKDRKLVTTYENEEDGKLAITHYKTLA
AYHYVALIQCNLETGRTHQIRAHMKSIGHSLFNDMSYGGNSVVKGTVTGKYKQFVENCFK
LLPRQALHAKTLGFIHPTTKEKMQFDSELPADMQAVLDKWERYVGEEK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgaaataccggaagaattagaagacggctttagtgaagacgaattattt
gagcaccatcgggttgtttgcgacccgggtcagtctcttatgcgcatcgataagttttta
atgtcgcgtattcagtacgctacccgttcgcgtatacaatatggtattgaaatagactct
gttaaagtaaacgataaatcaactaaagcaagctataaagtcagacccggcgacgtcatt
accatttctctgccgcatccgccacgcgaagatgtattgatcccggaagatattccgctt
gatattgtctatgaagatgatcagatcctgatcgtaaataaaaaaccagggatggttgta
catcctgcgcatggtaactggacaggtacgttggtaaatgcattggcatatcactttgaa
aacctgcctacacacgtgaacggaaaaatccgtccgggtttgatccaccgtattgataaa
gatacttcgggtttattggtaattgcaaaaacagattacgccatgacctttatggcaaaa
caatttgcggaccacagcatagaacgtacctattatgccatttgctggggcgtgccggat
cctaaaagcggtaccattaaaaattatttaggcagaagtacaaaagaccgcaaactcgta
actacttacgaaaacgaagaagacggcaagcttgccattacgcattacaaaacactggct
gcctatcattatgtagccttgatccagtgtaacctggaaacgggaagaacacatcagatc
cgtgcgcacatgaaatccatcggtcattcgctttttaatgacatgagttatggcggtaat
tcagttgtcaaaggcactgtaacaggtaaatacaaacagtttgttgaaaattgctttaag
ttattgcctcgtcaggcactgcatgcaaaaacactgggcttcatacatcctacaacgaaa
gaaaaaatgcagtttgatagcgaacttccggcagacatgcaggcggtactggataagtgg
gaacgttatgtgggcgaagaaaagtag
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