Cytophaga hutchinsonii: CHU_3687
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Entry
CHU_3687 CDS
T00385
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
chu
Cytophaga hutchinsonii
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chu03032
]
CHU_3687
03036 Chromosome and associated proteins [BR:
chu03036
]
CHU_3687
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_3687
DNA replication proteins [BR:
chu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHU_3687
Chromosome and associated proteins [BR:
chu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHU_3687
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHU_3687
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
RecA-like_ORC2
DUF2267
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
ABG60920
UniProt:
A0A6N4SWR4
LinkDB
All DBs
Position
4259190..4259522
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AA seq
110 aa
AA seq
DB search
MTKADVINEIAEKTGIDKADVTTTVEAFFKVVKDSMSEGHNIYVRGFGSFINKKRARKVA
RNISKNTAIIIDEHYIPSFKPAKVFVEKIKSSKKVKVMAEKYSNVDEEVD
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaggcagacgtaattaacgaaatcgcagaaaaaacaggaattgacaaagctgat
gtaacaacaacagttgaagcattctttaaggtagtgaaggactctatgtctgaaggccac
aacatttatgtaagaggttttggtagttttatcaacaagaaacgtgcacgtaaagtggct
cgtaacatttctaaaaacacagcaatcatcattgatgagcactacattccaagctttaag
cctgctaaggttttcgttgagaaaatcaaatcaagcaaaaaagtaaaggtaatggctgag
aaatacagtaatgttgatgaagaagttgactag
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