Cytophaga hutchinsonii: CHU_3698
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Entry
CHU_3698 CDS
T00385
Symbol
uvrA
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
chu
Cytophaga hutchinsonii
Pathway
chu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHU_3698 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chu03400
]
CHU_3698 (uvrA)
DNA repair and recombination proteins [BR:
chu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHU_3698 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHU_3698 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
UvrA_DNA-bind
AAA_21
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
nSTAND3
DnaJ_CXXCXGXG
AAA_23
AAA_22
AAA_15
AAA_33
ATPase_2
Viral_helicase1
NACHT
APS_kinase
RNA12
NTPase_1
cobW
Motif
Other DBs
NCBI-ProteinID:
ABG60931
UniProt:
A0A6N4SWJ6
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All DBs
Position
4270379..4273213
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AA seq
944 aa
AA seq
DB search
MKGTNVAKKEYALDIESLDPKQFIIIKGARVHNLKNIDVAIPRNKLVVITGLSGSGKSSL
AFDTLFAEGQRMYVESLSSYARQFLGRMEKPEVDYIKGVSPAIAIEQKVNSRNPRSTVGT
TTEIYDYLKLLFARVGHTISPISGNEVKKNSVTDVVDWIFNHAEGTRFMVLAPFKAKHDR
KSFEELQVLLQKGFTRLYLNDEVIHIEELIEKGAKALPAKADAWILIDRNSVNKTEEDAA
FRVSDSVQTAFYEGDGDCRIIVPEKETLDFCDRFEADGITFEEPSANFFSFNNPFGACKT
CEGFGHVLGIDEDLVIPDKSLSVYEGAIAPWRGDKMSEWLKPLIKSGIKFDFPIHRAIQD
LSPEQRQLLWDGNKYFEGLHAFFAYLETQTYKIQYRVMLSRFRGRTSCPDCRGTRLRKDA
SYVKVAKKSITDIVLMPVTEALQFFSDLKLQKGEEKIAERLLKEITNRLSYLEKVGLGYL
TLNRLTASLSGGEFQRIKLATSLGSALVGSMYVLDEPSIGLHPRDTGKLIEVLKMLRDMG
NTVIVVEHEEEVMRAADQIIDIGPDAGIHGGKLMFQGVIDDMLTHSGSYTTDYLTNRSSI
EVPKHRRKWNSFIEIKGARENNLKNINVKFPLHTFTVVTGVSGSGKSTLVKKILFPSLQK
LFGFSGEFTGKFDRMDGDIREVTQIEFVDQNPIGKSSRSNPVTYVKAYDLIRNLYAEQGL
SKSRAYKPGHFSFNVEGGRCEMCQGEGIVTVEMQFMADVHLTCEACNGKRFKQEILEVKY
NDKSISDILDMTIEESLTFFKDKPKLIEKLQPLSDVGLGYVHLGQSSSSLSGGEAQRVKL
ASFLGKSPEENNEHILFLFDEPTTGLHFHDIRKLLDSIQALVNKGNSVIVIEHNMEMIKC
ADWIIDIGPEGGNGGGDVIFEGTPEEMIKCKKGYTAKYLREKLK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaacaaacgtggcaaaaaaagaatacgcgctcgatatagaatcattagaccca
aagcaattcatcatcattaaaggtgcacgcgtgcacaatctaaaaaatattgatgttgcc
atccccagaaataaactggtcgttattaccggcctttcaggctcaggaaaatcttcccta
gcctttgatacgctttttgcagaaggtcagcgtatgtatgttgaaagcttaagttcctat
gcgcgccagttcctgggcagaatggaaaagccggaagttgattacatcaaaggtgtgtcg
ccggctattgccattgaacaaaaggtaaattcccgtaacccccgctctacggtaggtacc
acaacagagatctatgattatctgaaattattattcgcgcgcgtgggccatacaatctca
cctattagcggtaatgaagtgaaaaaaaattctgtgactgatgtcgtcgactggattttt
aaccacgcagaaggtacacgttttatggtgctggcgccattcaaagcaaaacacgacagg
aaatcatttgaagagctgcaggttcttttacagaaaggatttacgcgtttatacctgaat
gacgaagtaatacacattgaagagctgatagaaaaaggagcgaaagccttacctgcaaaa
gcagatgcatggattttaattgaccggaattcggtaaataaaaccgaagaagatgcagcg
ttcagggtttccgattctgtacagaccgcattttatgaaggagacggagattgcagaatc
attgtacctgaaaaagaaacactggatttttgtgatcgcttcgaagcagatggtattaca
tttgaagaaccttccgcaaactttttcagctttaacaatccattcggtgcctgtaaaacg
tgcgaaggtttcggccatgtactgggcattgatgaagaccttgttattcccgacaaatcg
ttatcggtatatgaaggtgcaatagcaccatggcgcggagataaaatgagtgaatggtta
aagccattgatcaaaagcggaataaaatttgattttccgattcatagagctatacaagat
ctttcacctgaacagcgtcaattgctctgggatggaaataaatattttgaaggcttgcac
gcattttttgcgtatttagaaacacagacatataaaatccaataccgcgtaatgctttcg
cgtttcagaggccgtacaagctgccccgactgccgtggcacacgtctgcgtaaggatgca
tcgtatgtaaaggttgcaaagaaatctattacagatattgtattaatgcctgttacagaa
gcgttgcaatttttctctgatctgaaacttcaaaaaggagaagaaaaaattgcagaacgt
ttattaaaagaaatcacaaaccgcttatcctatttagaaaaagtaggattgggttattta
accttaaaccgcttaacggcatctctttccggaggtgaattccagcgtatcaagctggca
acatcacttggcagtgctcttgtcggatctatgtatgtattggatgagccaagtattggt
ttgcacccgcgtgatacaggcaagctcatcgaagtattgaaaatgcttcgcgatatgggc
aacacggttattgtagttgaacacgaagaagaagtaatgcgtgccgcggaccagatcatt
gatattggccccgatgctggtattcacggcggaaagctgatgttccagggtgtgattgac
gacatgttaacacacagcggatcatacacgacagattatttaactaaccgctcttctatt
gaagtacccaaacacaggagaaaatggaattcatttattgaaataaaaggggcacgcgaa
aataatttaaagaatattaatgtgaagtttcctttacacacatttactgttgtgacaggc
gtaagtggttcaggaaaatcaaccttggtgaagaaaattttatttccgtctttacaaaaa
ctcttcgggttctccggtgaatttacaggtaagttcgaccgtatggatggcgatatccgt
gaggttacacagattgaatttgtagatcagaatccgatcggcaaatcttcccgttcaaat
ccggtaacctatgtgaaagcctatgatctgatccggaacttatatgcggagcaaggtttg
tcgaaatcgcgtgcctataaaccaggccacttctcgtttaacgttgaaggcggcagatgt
gaaatgtgccagggagaaggcatcgtaacggttgaaatgcaattcatggcagacgtacat
ctgacctgtgaagcgtgtaacgggaaacgttttaaacaggaaattttagaagtaaaatac
aacgacaaaagcatttcagacattttagatatgacgattgaagaaagtttaaccttcttc
aaagacaaacctaaactgattgaaaaactgcagcccttatcagacgtgggtttaggttat
gtacacttaggacaatcttccagttccctatcgggcggagaagcacaacgtgtaaaactt
gcttctttccttggcaaatcaccggaagaaaacaacgaacatatactgttcctgtttgat
gagcccacaacaggattgcatttccatgacatccgtaaattactggattccattcaggca
ttggtgaataaaggaaattctgtgattgtgatcgaacacaatatggaaatgatcaaatgt
gctgactggatcattgacattggccccgaaggcggtaacggcggcggtgacgtaatattt
gaaggcacacccgaagagatgattaagtgcaaaaaaggatataccgcaaaatacctgcgg
gaaaaattaaaataa
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