Campylobacter helveticus: CHELV3228_0356
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Entry
CHELV3228_0356 CDS
T04807
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
chv
Campylobacter helveticus
Pathway
chv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CHELV3228_0356 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chv03021
]
CHELV3228_0356 (rpoC)
03400 DNA repair and recombination proteins [BR:
chv03400
]
CHELV3228_0356 (rpoC)
Enzymes [BR:
chv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CHELV3228_0356 (rpoC)
Transcription machinery [BR:
chv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CHELV3228_0356 (rpoC)
DNA repair and recombination proteins [BR:
chv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CHELV3228_0356 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ARE79995
UniProt:
A0AAX2UJW7
LinkDB
All DBs
Position
323664..328214
Genome browser
AA seq
1516 aa
AA seq
DB search
MSKFKVIEIKEENRPRDFEAFQLRLASPERIKSWSYGEVKKPETINYRTLKPERDGLFCA
KIFGPIRDYECLCGKYKKMRFKGVKCEKCGVEVANSKVRRSRMGHIELVTPVAHIWYVNS
LPSRIGTLLGVKMKDLERVLYYEAYIVENPGEAYYDNENSKKVEFCDVLNEEQYQSLMQR
YENTDFKARMGGEVVRDLLANLDLVALLNQLKEQMQSTNSEAKKKTIVKRLKVVENFLNS
NLNTNINGEDAVPNRPEWMMITNLPVLPPDLRPLVALDGGKFAVSDVNDLYRRVINRNTR
LKKLLELDAPEIIIRNEKRMLQEAVDALFDNGRRANAVKGANKRPLKSLSEIIKGKQGRF
RQNLLGKRVDFSGRSVIVVGPKLRMDQCGLPKKMALELFKPHLLAKLEEKGYATTVKQAK
KMIENKTNEVWECLEEVVEGHPVMLNRAPTLHKLSIQAFHPVLVEGKAIQLHPLVCAAFN
ADFDGDQMAVHVPLSQEAIAECKVLMLSSMNILLPASGKSVTVPSQDMVLGIYYLSLEKV
GAKGAHKICTGIDEVMMAMESNCLDIHANIQTIIDGRKCATTAGRLIIKSILPDFVPENM
WNKVLKKKDIAALVDYVYKQGGLHLTASFLDKLKNLGFEYATKAGVSISIADIIVPNEKQ
KAIDEAKKQVREIQNSYNLGLITSGERYNKIIDIWKSTNNILSKEMMELVQKDKDGFNSI
YMMADSGARGSAAQISQLAAMRGLMTKPDGSIIETPIISNFREGLNVLEYFISTHGARKG
LADTALKTANAGYLTRKLIDVAQNVKITTYDCGTHEGIEINEITADSSIVETLEERILGR
VLAEDVIDPITNSVLFAEGALIDEEKARVLSESGIKSVNIRTPITCKAKKGICAKCYGVN
LGEGKLVKPGEAVGIISAQSIGEPGTQLTLRTFHSGGTASTDLQDRQVSAQKEGFIRFYN
LKTYKNKEGKNIVANRRNAAILLVEPKIKAPFKGTISIESIHEDVIVSIKDKKKEAKFIL
RKYDLAKPNELAGVSGNIDGKLYLPYQNGSEVNENESIVEVIKEGWNVPNRIPYASEILV
KDGDPIVQDIKAGETGTLKFYILKGDGLDRVRKVKKGDIVKEKGFFVVIADENDREAKRH
YIPRESRIEFDDSAVIDDVNAIIASAAKKDKSVIAEWDAYNNTIIAEIDGVVSFEDIEAG
YSADEQLDEATGKRSLVINEYLPSGVRPTLLIAGKGDKVARYQLEPKTVIFIHDGDKVSQ
ADVLAKTPKAVAKSKDITGGLPRVSELFEARKPKNAAVIAEIDGVVRFDKPLRSKERIII
EAEDGSSAEYLIDKSKHIQVRDGEFIHAGEKLTDGLISSHDVLKILGEKALHYYLISEIQ
QVYRGQGVVISDKHIEVIVSQMLRQVKVVDSGHTKFIEGDLVSRRKFREENEKIVKMGGE
PAIAEPVLLGVTRAAIGSDSVISAASFQETTKVLTEASIAGKFDYLEDLKENVILGRIIP
VGTGLYAEENFKLQEK
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatttaaagtaatagagataaaagaagaaaatcgccctagagattttgaagcg
tttcagttaagattagccagtcctgagcgtattaaatcttggtcttacggtgaggttaaa
aaacctgaaacgattaattatcgcactttaaaacctgaaagagatggacttttttgtgca
aaaatttttgggccgattagagattatgagtgtctttgtggtaaatacaaaaaaatgcgc
tttaagggtgtaaaatgtgaaaaatgcggtgttgaagttgcaaattctaaagtgcgtcgc
tctagaatggggcatatcgagcttgtaacacctgtggctcatatttggtatgttaattct
ttgccaagtcgtataggaacgctacttggtgttaagatgaaagatttagagcgcgtattg
tattatgaagcctatatagtggaaaatccgggtgaagcttattatgataatgaaaattct
aaaaaagttgaattttgtgatgttttaaacgaagagcagtatcaaagcttaatgcaacgc
tatgaaaatactgattttaaagctagaatgggtggtgaggtcgttcgcgatttgcttgca
aatttagatttagttgctttgctcaatcagcttaaagagcaaatgcaatcaaccaattcc
gaagcgaagaagaagacgattgttaagcgtttgaaggtggtggagaatttcttaaattct
aatctaaatactaatattaatggcgaagatgctgtgccaaatcgtcctgagtggatgatg
attacaaatttgcctgttttaccacctgatttgcgtcctttggtagctttagatggagga
aaatttgcggtaagtgatgtcaatgatttataccgccgcgtgataaatagaaacacccgt
cttaaaaagcttttagagcttgacgctccagaaattattataagaaacgaaaaaagaatg
cttcaagaagcagttgatgcgttatttgacaacggacgccgtgcaaatgccgttaagggt
gcaaataaacgccctttaaaatctttaagtgaaattatcaaaggaaagcaagggcgtttt
agacaaaatttgctaggaaaaagggtggatttctcaggtcgtagcgttatcgttgtggga
cctaagcttaggatggaccagtgtggtttgcctaaaaagatggctttagagctttttaaa
ccacatcttttagctaaacttgaagaaaaaggctatgcgaccactgttaaacaagcaaaa
aagatgatagaaaataaaacaaacgaggtttgggagtgccttgaagaggtggttgagggg
catcctgtgatgcttaaccgtgcgccgacactacataagctttccattcaggcatttcac
cctgttttggttgagggtaaggcgattcaactccaccctctagtttgtgcagcgttcaat
gcggactttgatggggaccaaatggctgtgcatgtgccactttcccaagaagccatagca
gaatgtaaagttttaatgctttcttctatgaatatccttttgccagcaagtggaaagtct
gtaactgtgccttctcaagatatggttttaggaatttattatctttctttagaaaaagtt
ggggcaaaaggggcgcataaaatttgcacaggtattgatgaagtgatgatggcaatggag
tcaaattgtcttgatattcacgctaatatccaaacgattattgatgggcgtaagtgtgct
actacggcggggcgtttgataattaagtcaatcttacctgattttgtgcctgaaaatatg
tggaataaagttttaaagaaaaaagacattgcggctttagtcgattatgtttataagcag
ggaggtctgcatttaactgcgagtttcttggataagcttaagaatttaggttttgagtat
gcgactaaggcgggagtttctatttccatagcggatattatcgtgccaaatgaaaagcaa
aaagctattgatgaagcgaaaaagcaagttagagaaattcaaaattcttataatctaggc
ttgataacttccggcgaaagatataataagattatagacatttggaaaagcacaaataac
attttatccaaagagatgatggagcttgtgcaaaaagataaagatggttttaactctatc
tatatgatggcagatagtggtgctagaggtagtgcggcacaaatttcgcagcttgcggcg
atgagaggcttgatgactaagcctgatggtagcattattgaaacacctattatttcaaat
ttccgcgaagggcttaatgtgcttgagtatttcatctcaacacacggagctagaaaagga
ctcgctgataccgcacttaaaacggcaaatgctggttatcttacaagaaagctcatagat
gtggcacaaaatgttaagattacaacttatgattgtggcacgcacgagggtattgagata
aacgagattacagcggatagctccatagtggaaactttagaagaaagaattttgggtagg
gttttggctgaagatgtgattgaccctattacaaattctgttctttttgctgagggagct
ttaatcgatgaagaaaaggctagagtgcttagtgagagtgggattaagagtgtaaatata
cgcacccctattacttgcaaagcaaaaaaaggaatttgtgcaaaatgctatggggtcaat
cttggcgaaggtaagcttgtaaagccgggtgaagcagttggtatcatctcagcgcaatcc
atcggtgagcctgggacacagctaactcttagaacttttcatagtggtggaacggctagc
acagacttacaggatagacaagtaagtgcgcaaaaagagggctttataagattttataat
cttaaaacctataaaaataaagagggtaaaaatatcgttgcaaatcgtagaaatgcggcg
attttacttgtggagccaaaaatcaaagcaccatttaaaggaactattagcatagaaagc
attcacgaagatgtgattgtttcgataaaagataagaaaaaagaggctaaatttatatta
agaaaatatgatttggctaagccaaatgagttagctggtgtgagcggaaatatagacgga
aagctttatttgccttaccaaaatggcagtgaagtcaatgaaaatgagagtatagtggag
gtgattaaagagggctggaatgtgccaaatcgtattccttatgcaagtgaaattttagtc
aaagatggcgatcctatcgtgcaagatatcaaagcgggtgaaacaggaactttgaaattt
tacattcttaaaggcgatggtttggatagggtgcgtaaggttaaaaaaggcgatatagtt
aaggaaaaaggcttttttgttgtcattgcagatgagaatgatagagaggcaaaaaggcat
tatatccctagagaatctagaatagaatttgatgatagtgcggttatagacgatgtgaat
gccattatagctagtgcggcaaaaaaagataaaagcgtgatagccgagtgggatgcgtat
aataatactatcatagcggagattgatggggtggtgagctttgaggatattgaagctgga
tatagtgcagatgagcagttagacgaggcgactggtaagcgttctttggtaatcaatgag
tatttaccaagtggagttcgcccgaccttacttatagctggaaagggagataaagttgcg
cgttatcagcttgagccaaaaacggtgatttttatccacgatggagacaaagtttcacaa
gctgatgttttagctaaaacgccaaaagcggtggctaaatctaaagacatcacaggtggt
ttgccgcgtgtaagtgagctttttgaggcgagaaagcctaaaaatgccgctgtgatagca
gagattgacggagttgtgcgttttgacaagcctttgcgttctaaagaaagaattattatt
gaggcagaagatggttcaagtgcagaataccttatcgataagtcaaagcatatccaagtg
agagatggcgaatttatccacgctggagaaaagcttacagacggcttgatttcaagccac
gatgtgcttaaaattttaggcgaaaaggctttgcattattatcttattagcgaaattcag
caagtgtatcgcggacagggcgttgtgatttctgataagcatatcgaggtaattgtttct
caaatgttaaggcaggtaaaggtggtagatagtgggcatactaaatttatcgagggcgat
ttggtttcacgccgtaaattccgcgaagaaaatgaaaaaatcgtcaaaatgggcggtgag
ccagccatagcagagcctgtgcttttgggtgttaccagagcggcgataggaagtgatagt
gtgatttcagcggcatctttccaagaaacaactaaggttttaaccgaagcaagtatagct
ggtaaatttgattatttagaagatttgaaagaaaatgttatactaggtcgcattatacct
gttggaacaggactttatgcagaggaaaatttcaaacttcaagaaaaatga
DBGET
integrated database retrieval system
