Campylobacter helveticus: CHELV3228_1001
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Entry
CHELV3228_1001 CDS
T04807
Name
(GenBank) hypothetical protein, Cas4 family
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
chv
Campylobacter helveticus
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
chv02048
]
CHELV3228_1001
Enzymes [BR:
chv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
CHELV3228_1001
Prokaryotic defense system [BR:
chv02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
CHELV3228_1001
Subtype I-B factors
CHELV3228_1001
Subtype I-C factors
CHELV3228_1001
Subtype I-D factors
CHELV3228_1001
Type II CRISPR-Cas system
Subtype II-B factors
CHELV3228_1001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
MapZ_C2
NERD
SfsA
Motif
Other DBs
NCBI-ProteinID:
ARE80591
UniProt:
A0A4V7IFU6
LinkDB
All DBs
Position
complement(961225..962247)
Genome browser
AA seq
340 aa
AA seq
DB search
MPLAFVTLARLCLALKVNEKGKTMEKNKFDEFVAKNLPKALKKASLQDLGDRASYVGSSD
ISSCLRKTYLDKTSENDYDLATLIRFQRGHVAEGIVKAMLDGLNPISQLELSSSYEGVTL
KAHIDFTLETKNEIIIVEAKSVSTKVDEPYLSWNLQVQYQMAMLAKSKSKNIRAYVVAIN
VNTGWFKSFEIERNEALTQIAFEKAKKLSLALQSKVEPEAEIQLFCGVCSHKATCPLMLK
GASELSGELLSIAQSLIELNTKKKELELELDEKKAILEEYMRSHNAKKLQVENSFITLSN
DTQTTSFDTKALQKDNPSLYEELFEKYQKTSQRKGYISIK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgcctttagcgtttgttactttagcgaggctttgccttgcgttaaaagtaaatgaaaaa
ggaaaaactatggaaaaaaataaatttgatgaatttgtagcaaagaatttgccaaaagct
ttaaaaaaggcaagtttgcaagatttaggtgatagagcttcttatgtaggctcatcagac
atttcaagttgtttaagaaaaacctacttagataagacaagcgaaaacgattacgattta
gctacgctgattcgttttcaaagaggacatgtggctgagggcattgttaaagctatgctt
gatggattaaatcccatttctcagttagaacttagctcatcatacgagggtgttacgctt
aaagctcacattgattttactttagaaactaaaaatgaaatcattatcgtagaagcaaag
agtgttagcactaaggttgatgagccttatttaagttggaatttgcaggtgcagtatcaa
atggcaatgttagctaaaagcaagagcaaaaatataagagcttatgttgtggctatcaat
gtcaatacaggttggtttaaaagctttgaaatcgaaagaaacgaagctttaacacaaata
gcgtttgaaaaggctaaaaagctttctcttgctttacaaagtaaggtggagcctgaagct
gaaattcaacttttttgtggagtttgttctcacaaagcaacttgccctttaatgcttaag
ggagcaagtgagctaagtggagagcttttaagtatagcacaaagcttaatagagctaaat
actaagaaaaaagagctagaacttgagcttgatgagaaaaaggctatacttgaagaatat
atgcgttctcacaatgctaaaaaacttcaggttgaaaatagcttcatcacgctttcaaac
gacactcaaaccacaagctttgataccaaagccttgcaaaaagataatcctagcctttat
gaagagctttttgaaaaatatcaaaaaacttcacaaagaaaaggttatatcagcataaaa
taa
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