Campylobacter helveticus: CHELV3228_1227
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Entry
CHELV3228_1227 CDS
T04807
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chv
Campylobacter helveticus
Pathway
chv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHELV3228_1227 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chv03019
]
CHELV3228_1227 (pnp)
03016 Transfer RNA biogenesis [BR:
chv03016
]
CHELV3228_1227 (pnp)
Enzymes [BR:
chv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CHELV3228_1227 (pnp)
Messenger RNA biogenesis [BR:
chv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CHELV3228_1227 (pnp)
Transfer RNA biogenesis [BR:
chv03016
]
Prokaryotic type
tRNA degradation factors
CHELV3228_1227 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
ARE80809
LinkDB
All DBs
Position
complement(1165129..1167339)
Genome browser
AA seq
736 aa
AA seq
DB search
MLNLFKNFKKLLSNDKGNTMQYSIQINQNLEVFDIDKVAKQAAGSVLMRVGKSVVLAAVA
REDKQVEEDFLPLTVQYIEKAYAAGRIPGGYIKRETKPGDNETLTARIIDRSLRPLFPKG
YAYPTQIVVMVLSADDEVDLQVMSLNAASVALYLSGIPIKAPVCGVRIARINNNFVLNPS
NSKLKESTLDLYVAGVKDELLMIEMRALPSESEGGAMVETSFAEALSGTSIYEQAMNELS
EDEVIEALNLAQKAILNGSNAYEEAFSKHRKNEELELRAEIENIELFEFIKQNFTQEIKF
AINQMAKSERASELEKITKELMKLENIIDKYSQEDVFNALSKVKKELVRTQILKERKRAD
GRALNEVRAIEIETNILPNAHGSCLFTRGQTQALVVATLGGENDAQMVDLLNEKNPISER
FMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDENYPYVVRLVSEILESNGS
SSMASVCGGSLALRAAGVPSIKLVAGVAMGLVLEGDNYAVLTDIMGLEDHDGDMDFKVAG
SKDGITALQMDIKLGGIDEKILKNALYQAREARLHILDLMEEANAQIVVNEDVLPKLELF
SVEPSKIVDIIGQAGKTIKEIIEKFGVSIDLDREKGEVKIAGNQSEQIKAAKDYIISITS
KGKKFSKDLAHFKVGEEFLGAEVKKIAPFGAFIALKDGVDGLLHSSKMKTKLSENDKIDV
KISEIKNGKISVDLLS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatttatttaaaaatttcaaaaaattattatcaaatgataaaggaaacacgatg
caatacagcatacaaattaatcaaaatttagaggtttttgatatagataaagttgctaaa
caagcggctggctctgttttaatgagagtgggtaaaagcgtagttttagctgctgtggca
agagaggataagcaggtcgaagaagattttttacctttaacggtgcaatacatcgaaaag
gcttatgcagcaggtagaattccgggaggctatattaaaagagaaaccaagcccggagat
aatgaaacccttacggcaaggattattgatagaagtttaagaccactttttcctaaaggc
tatgcttatcctacgcaaattgttgtaatggtgctttctgcggatgatgaggtggattta
caggtaatgagtttaaatgctgcgagtgtggctttatatctaagcggaattcccattaaa
gcgcctgtttgtggggtaagaattgcgaggattaataataattttgtgttaaatccaagc
aattctaagcttaaagaaagcacgctagacctttatgtggctggtgttaaggatgaactt
ttaatgatagaaatgagagctttaccaagcgagagtgagggtggggctatggtggaaact
agttttgcggaggctttatctggaactagcatttatgaacaagcgatgaatgaattaagc
gaagatgaggtcattgaggctttaaatttggcacagaaagcaatattaaacggctcaaat
gcttacgaagaagcattttctaaacaccgcaaaaatgaggaattagaacttagggcagaa
attgaaaatatcgaactttttgaatttatcaagcaaaatttcacacaagagattaaattt
gctatcaatcaaatggcaaaaagtgaaagagcaagtgagctagaaaaaatcactaaagaa
cttatgaagcttgaaaatatcattgataaatacagccaagaagatgtttttaacgctctt
tctaaggtcaaaaaagagcttgtaagaacacaaattttaaaagagagaaaaagggctgac
ggacgcgccttaaacgaggtaagagccatagaaatagaaacaaacattttaccaaacgcg
cacggctcttgtctttttacacgcggacaaactcaagccttagttgtggcaactttgggt
ggggaaaatgacgcacaaatggtagatttgctgaatgagaaaaatcctataagcgaacgc
tttatggtaaattacaatttcccgggcttttctgtgggcgaggcaagtcctattaaggcg
ccgggtagaagagagcttggacacggaaatttagctaaaagagcgctttatccaagtgtt
gatgaaaattatccttatgtggtgcgtttggtgagtgaaattttagaaagtaatggctct
agctctatggcgagtgtgtgcggtggctcactagccttaagagcggctggagttcctagc
atcaagcttgtagcgggcgtggctatggggcttgttttagagggtgataattacgcggtt
ttaacggacattatgggacttgaggaccacgatggggatatggattttaaagtcgctgga
agcaaggatggcattaccgcacttcaaatggatattaaattaggtgggattgatgagaaa
attcttaaaaatgccctttatcaagcaagagaggcgagacttcacattttggatttaatg
gaagaagctaacgcgcaaattgtcgttaatgaagatgttttaccaaaattagaacttttt
agcgttgaacctagtaaaatcgtcgatattatagggcaagcaggtaagacgattaaagag
attatcgaaaaatttggcgtttcgattgatttggatagagaaaagggcgaggtgaaaatc
gctggaaatcaaagtgagcaaatcaaagcggcgaaagattatatcatcagcattacaagt
aagggaaagaaattttctaaagatttagcgcattttaaagtgggtgaagaatttcttggg
gctgaagttaaaaaaatagccccttttggagctttcatcgctttaaaagacggggtcgat
ggcttactccatagctctaaaatgaagactaaattgagtgaaaatgataagattgatgta
aaaatcagtgagattaaaaatggcaaaatttcagtggatttactctcttag
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