Campylobacter helveticus: CHELV3228_1596
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Entry
CHELV3228_1596 CDS
T04807
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chv
Campylobacter helveticus
Pathway
chv03410
Base excision repair
chv03430
Mismatch repair
chv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHELV3228_1596 (recJ)
03430 Mismatch repair
CHELV3228_1596 (recJ)
03440 Homologous recombination
CHELV3228_1596 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chv03400
]
CHELV3228_1596 (recJ)
DNA repair and recombination proteins [BR:
chv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CHELV3228_1596 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CHELV3228_1596 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CHELV3228_1596 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ARE81162
UniProt:
A0AAX2UII3
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All DBs
Position
1536754..1538337
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AA seq
527 aa
AA seq
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MNIITKRNIKQILAARFEKDLHTKLCDLPLPCCLKDAYKAAHRIKEAIEKNEKVAIVGDY
DVDGIISCVILSEFFDDIGFDYVVKIPNRFKDGYGLNEEIINELNVDVIITVDNGIAALE
AAKLCKEKKIDLIITDHHTPLQTLPDAYAIINPKQKDCEFPDIEICGAQVAWYLIAALKE
VCKLKYDMCKFLELLAIAIIADMMELRDLNRALVRRGIECINKSKRAAFKAIKHYYQKDK
FAIDNISFLIAPLINSAGRMDDASVSYKFLHTKDFNEALNYLEQIISFNESRKDEEKQLF
EESLRQVDEDDACVIVGGEKWHEGVLGIVASRLAKHFKKPSFVFSINENNLKGSARSVGK
IDILNLISKANIYLKNYGGHKGAAGLSLELKDYENFKSLIQKESALINKEEFLETEEILG
VLEPSEIDFEMLEILESFEPFGHKNPRPCFVLQNLKVKNKKLLGNEKKHLKLILVKENRT
IEALFFNFDKEPNLEDSISLIGNISKNEFRGLITPQFIIQEILPLSS
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcataactaaaaggaacattaagcaaattttagctgcgcgttttgaaaaagat
ttgcatactaagctttgtgatttacccctgccttgttgcctaaaggacgcctataaggca
gcgcatcgcattaaagaagcgattgagaaaaatgaaaaagttgctattgttggagattat
gatgttgatgggattatttcctgtgtgattttgagcgaattttttgacgatataggtttt
gattatgtcgtaaaaattcccaaccgctttaaagatggatatggcttaaatgaagaaatt
atcaatgaacttaatgttgatgttatcatcacggttgataatggcatagccgccctagag
gcagcaaaactttgcaaagaaaaaaagatagacctaatcatcacagaccatcacacacct
ttacaaactctcccggatgcttatgccattatcaatcccaagcaaaaagattgcgaattt
ccagacattgaaatttgtggagcgcaggtagcttggtatttaatcgccgctttgaaagaa
gtgtgtaaattaaaatatgatatgtgtaaatttttagagcttctagctatagccatcatt
gctgatatgatggagcttagggacttaaatagagccttagtaagaagagggatagagtgc
attaataaatctaaaagagcagcttttaaggcgataaagcactattatcaaaaagataaa
tttgccatcgataacattagctttttaattgctccacttattaatagtgctggcagaatg
gacgatgcgagtgtttcttataaatttttacatactaaagattttaatgaagctctaaat
tatttagaacaaatcataagctttaacgaaagtcgaaaagatgaagaaaaacagcttttc
gaagagagtttaaggcaggttgatgaagatgatgcttgtgtgattgtcggtggagaaaaa
tggcacgaaggggtgcttggtatcgtagcaagtcgcttggcaaaacattttaaaaaacct
tcttttgttttttctattaatgaaaataacttaaaaggtagtgccagaagcgtaggtaaa
atagacattttaaatttaatatccaaagcaaatatctacctaaaaaactatggcggacat
aaaggtgctgctggactaagtttagagcttaaggattatgaaaattttaagagtttgata
caaaaagaaagtgctttaattaacaaagaagaatttttagaaacagaagaaattctaggg
gtgctagaaccgagtgagattgattttgaaatgcttgaaattttagaaagctttgagcct
tttgggcataaaaatcctcgcccctgtttcgttctacaaaatttaaaggtcaaaaacaaa
aaacttttaggcaatgagaaaaaacatctaaaactcatcttggttaaagaaaatagaacc
atagaggctttattttttaattttgacaaagagccaaatttagaagatagtatctctctt
ataggaaatatttccaaaaatgaatttagaggactcatcacacctcaatttattatccaa
gaaattcttccgctatcttcttaa
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