Campylobacter helveticus: CHELV3228_1686
Help
Entry
CHELV3228_1686 CDS
T04807
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
chv
Campylobacter helveticus
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chv03016
]
CHELV3228_1686 (truD)
Enzymes [BR:
chv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CHELV3228_1686 (truD)
Transfer RNA biogenesis [BR:
chv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHELV3228_1686 (truD)
Prokaryotic type
CHELV3228_1686 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ARE81248
UniProt:
A0AAX2UL84
LinkDB
All DBs
Position
1617964..1619094
Genome browser
AA seq
376 aa
AA seq
DB search
MNSAEENIIFKPLRVLRHSPINVHFSKNSEDFVVREKPLYEFSGEGEHLILQICKKDLST
SEALRILSEFSGIKMRDFGYAGLKDKQGYTSQYISLPKKFESTLTNFSHQKMKISQSFTH
NNKLKIGHLKGNSFFIRLKKVLANDALKLEQALENLNKTGFANYFGYQRFGKFGDNYKEG
LEILRGKKMKNVKMKDFLISAFQSELFNRYLSKRVEISHFAKEFSIKELSEIYKISKEEA
KNIKTQKQFFKLLNNEVLGHYPFGKCFLCENLEKELERFTARDISAMGLLVGAKAYRCGE
GFAKNLEQEIFKEGLKFEDKMQGSRRFLWGYLKDLSYNYDAQKAHFSFEFFLEKGSYATV
ILEELLQNLEEKTNFF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagcggaagagaacatcatttttaagcccttacgcgtcttaagacatagccct
ataaatgtgcattttagtaaaaatagcgaagattttgttgtgagagaaaaaccactctat
gaatttagtggagagggagagcatttaatcttgcaaatttgcaaaaaagacctaagcacg
agcgaggctttaagaattttaagtgaatttagtgggattaagatgcgggattttggctat
gctggacttaaagataagcaaggctacacctctcaatacatctccctaccaaaaaaattc
gaaagcactttgacaaatttttcgcatcaaaaaatgaaaatttcgcaaagcttcacgcat
aacaataagctaaaaataggacatttaaaaggaaattctttttttattaggcttaaaaag
gtgcttgcaaatgacgcccttaaattagaacaagccctagaaaatctcaataaaacaggc
tttgcgaattattttggctatcagcgttttggtaaatttggggataattataaagagggg
cttgaaattttacgcggtaaaaaaatgaaaaatgttaaaatgaaagattttttaatctcc
gcttttcaaagcgagctttttaaccgctaccttagcaaaagagtggaaatttcgcatttt
gcaaaggaatttagcataaaagaacttagtgaaatttacaaaatttccaaagaagaagca
aaaaatatcaaaacacaaaaacaatttttcaagcttttaaataatgaagttttagggcat
tatccttttggaaaatgttttttatgtgaaaatttagaaaaagaacttgaaagatttacg
gcaagagatattagcgctatggggcttttggtaggagctaaggcgtatagatgtggggaa
ggatttgctaaaaatttggagcaagaaatttttaaagagggtttgaaatttgaagataaa
atgcaaggttcaaggcgttttttatgggggtatttgaaagatttaagctataactacgac
gcacaaaaagcccattttagttttgaatttttcctagaaaaaggctcttatgcgacggtg
attttagaggaacttttgcaaaatttagaagaaaaaactaattttttttaa
DBGET
integrated database retrieval system
