Campylobacter helveticus: CHELV3228_1800
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Entry
CHELV3228_1800 CDS
T04807
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
chv
Campylobacter helveticus
Pathway
chv03030
DNA replication
chv03430
Mismatch repair
chv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHELV3228_1800 (dnaE)
03430 Mismatch repair
CHELV3228_1800 (dnaE)
03440 Homologous recombination
CHELV3228_1800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chv03032
]
CHELV3228_1800 (dnaE)
03400 DNA repair and recombination proteins [BR:
chv03400
]
CHELV3228_1800 (dnaE)
Enzymes [BR:
chv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHELV3228_1800 (dnaE)
DNA replication proteins [BR:
chv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHELV3228_1800 (dnaE)
DNA repair and recombination proteins [BR:
chv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHELV3228_1800 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ARE81349
LinkDB
All DBs
Position
complement(1729956..1733549)
Genome browser
AA seq
1197 aa
AA seq
DB search
MSQFTHLHLHTEYSMLDGANKLKELALTLKEQGATSVAMTDHGNMFGAIDFYQTMRAQGL
KPIIGLEAYLHNMDDLGDKSSRQRFHLCLYAKNEVGYKNLMYLSSQSYIHGLYYYPRINK
KLLEKHSEGLICSSACLQGEVNWHLNIHNERNVRFGAKGYEAAKEAALWYKRVFGEDFYF
EIMRHGINDQRAIDDDIIRLSRELDVKIIATNDTHYTFKERADAHEVFMCIGMGKRFNDP
DRMRHSVKEFYVKTAEQMSELFADIPEAISNTQDLANKCNLELKLGNPTPPNFKFTREYA
KEFNIALPQEKVEFSFENDDLIFEYLCRKGLDERLKFIDEDKHEAYKERLETEIKIIKEM
KFSGYMLIVHDFIKVAKDKNIPVGPGRGSAAGSLVAYSLKITDIDPIPYNLLFERFLNPE
RVSMPDIDVDFCQDRRGEVIDYVIDKYGSDKVAQVSTFNKLLAKGVIRDVARVLDISLQD
VDEFIKLVPEELKITLDEAYEKEPKIKEFIEKHPKGKELWEYAKALEGLNRNAGMHAAGL
VISNESLWHKTPLFRQSKNDERHLITQYSKDHLEDVDLIKFDFLGLKTLTLIHNAIKLIK
ERYNKDIIWESIDVNDSKVYKTIQSGNTLGIFQIESDGMQSLNARLKPENFEDLVAVLAL
YRPGPMESGMLDDFIDRKHGLKKIVYPFDVLKEVLEPTYGVIVYQEQVMQIVQIIGGFSL
GGADVVRRAMGKKDPEKMKKLKDEFADGAVKQGYDRAKAEDLWELIVKFAGYGFNKSHSA
AYGLITFQTAYLKTYYPSEFMAALLTSEENKVEKVAVYIEEMKKMNIKLLPPNINKAISE
FSAIKQDDGTEAIVYGLGAIKSVGRPAIENILELRAKNGNFKDLHDFLSKIDTAKINRRT
LEGFVKAGSFDDFGFTRKCLFNNLDILAESARKMAEVRKNSASSLFGAEELNADTKINMT
IDNSEFEAMEKLTYEKEILGIYISGHPLDKFFEEINTIEYTKSIDFENLKGSGEILSIGK
IENFKSLMSKSGKRYGILEILDFYSSFETTIFESSIEEIENIIKERKNDAFGFMLGFKND
DARLNFTLRGIRTLDEIKNGDFKAVKKYSSKKFEKKNDFTKEPMEFENNIIELDLSRLNK
ELIYEIHEIARNAHNPNEKGNKKLVLRVISAGSCLLYHTDFIISDSVSEKIASKYAG
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatttacgcatcttcacttacatacagaatattcaatgctagacggcgctaat
aaacttaaagaacttgcccttactttaaaagagcaaggtgctacaagtgtggcgatgaca
gaccacggaaatatgtttggggcgattgatttttaccagactatgagagcgcaaggactt
aagccgataattgggcttgaggcgtatttacataatatggacgatttgggcgataaaagc
tcaaggcagcgttttcacctctgcctttacgcaaaaaatgaagtgggctataaaaatttg
atgtatcttagctcccaaagctatattcacgggctttattattatccgcgtattaataaa
aagcttttggaaaagcatagcgagggtttgatttgctcttcggcttgtttgcaaggtgag
gtaaattggcacttaaatatccataatgaaagaaatgttcgttttggtgcgaaaggctat
gaagcggcgaaagaggcggctctttggtataaaagggtgtttggggaggatttttatttt
gagattatgaggcacggcattaatgaccaaagggctattgatgacgatattataaggctt
tcaagggagcttgacgttaaaatcatcgccacaaacgatacgcattatacttttaaagaa
agagccgatgcgcacgaggtttttatgtgtataggtatgggtaaaaggttcaatgacccg
gatagaatgcgtcatagcgtgaaagaattttatgtgaagactgctgagcaaatgagtgag
ctttttgccgatataccagaggcgatttctaacactcaagatttggcaaataaatgcaat
ttagagctaaaattaggaaatccaacccccccaaatttcaaatttacaagagaatatgct
aaggaatttaatattgccttaccgcaggaaaaagtggaatttagttttgaaaatgatgat
ttgatttttgaatatctttgccgaaaagggcttgatgagaggctaaaattcatcgatgaa
gacaagcacgaagcttataaagagagattggaaacggaaattaaaattatcaaagagatg
aaattttcaggctatatgctgatagttcatgacttcattaaggtagctaaggacaaaaat
atccctgtgggaccgggtaggggttcggctgctgggagtttggtggcgtattctcttaaa
attacagatattgaccctatcccttacaatttactttttgagcgttttttaaatcccgag
cgtgtaagtatgcccgatattgatgtggatttttgtcaagataggcgtggagaggtgatt
gactatgtgattgataaatatggtagcgacaaggtcgcgcaggtaagcacttttaacaag
cttttagctaagggcgtgatacgcgatgtggcgagggttttggacattagtttgcaagat
gtcgatgaatttattaagcttgtgcctgaagagcttaaaatcactctcgatgaggcttat
gagaaagagcctaaaattaaagaatttatagaaaagcatcctaaaggcaaggaactttgg
gagtatgctaaggctttagagggcttaaatagaaatgcaggtatgcacgcggctggactt
gtgatttcaaatgaaagtttatggcataaaactccgctttttaggcaaagtaaaaatgat
gagaggcatttgataacgcagtattctaaggaccatttagaagatgtggatttaatcaaa
tttgacttcttggggcttaaaacgctaacccttatccataatgccattaagctgataaag
gagcgttataataaagacatcatttgggagagcattgatgtcaatgattctaaggtgtat
aaaacgatacaaagtggaaatactttagggatttttcaaattgaatccgatggtatgcaa
agcttaaatgcaaggcttaagcctgagaattttgaagatttggttgcggtgttagcgctt
tatcgtcccggtcctatggagtctggaatgcttgatgattttatcgacagaaagcacgga
cttaagaaaatcgtttatccttttgatgtgcttaaagaagtgcttgagccaacttatggc
gtgattgtttatcaagagcaggttatgcaaattgtccaaattataggcggtttttcttta
gggggtgcggatgtcgtgcgtagggctatggggaaaaaggaccctgaaaagatgaaaaag
ctcaaagacgaatttgctgatggtgctgtaaaacagggctatgatagagctaaggcggag
gatttgtgggagcttattgttaagtttgcgggttatggttttaataaatctcactccgca
gcttatgggcttatcacttttcaaacggcttatttaaagacttattacccaagtgaattt
atggcagcacttttaacgagtgaggaaaataaagtcgaaaaagtcgctgtgtatatcgaa
gagatgaaaaagatgaacatcaagcttttgccacccaacattaataaagctatcagtgaa
tttagtgccattaaacaagatgatggaacagaggctatcgtttatggtttaggtgcgatt
aagagtgtgggaagacctgcgattgaaaatattttggaactaagggctaaaaatggaaat
tttaaagatttgcacgactttttaagcaaaattgacacagctaagattaatagaagaaca
cttgagggctttgttaaggcgggttcttttgatgattttggttttactagaaaatgtttg
tttaataatcttgatattttggctgaaagtgctagaaaaatggctgaagtgagaaaaaat
tcagcgagttctttatttggtgcggaagaattaaatgcggataccaagataaatatgaca
atcgacaatagcgaatttgaagctatggaaaaattaacttacgagaaagaaattttagga
atttatatttcagggcatcctttggataaattttttgaagaaattaacaccatagaatac
accaaaagtatagattttgaaaatcttaagggtagcggggaaattttaagtataggtaaa
attgaaaattttaaaagcttgatgagtaagagcggaaaacgctacggcatacttgaaatt
ttggatttttactcttcttttgaaacgacaatttttgaatcgagcattgaagagatagaa
aacatcattaaagagcgtaaaaatgacgcttttggctttatgcttgggtttaaaaatgat
gacgcgagacttaattttactttaaggggaattcgcactttagatgagattaaaaacggc
gattttaaggctgtgaaaaaatattcttctaaaaaatttgagaagaaaaatgacttcact
aaagagcctatggaatttgaaaataacattatagagcttgatttaagtcgtttaaataaa
gagcttatctatgaaattcacgaaatagcaagaaatgctcacaatccaaacgaaaaaggc
aataaaaagcttgttttaagggttattagtgcgggttcttgtttactttatcatacggat
tttatcatttctgatagcgtgagcgaaaagatagcgagtaaatatgcagggtga
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