KEGG   Campylobacter hepaticus: A2J15_006055
Entry
A2J15_006055      CDS       T05589                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
chw  Campylobacter hepaticus
Pathway
chw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A2J15_006055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chw03019]
    A2J15_006055
Messenger RNA biogenesis [BR:chw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A2J15_006055
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B_6
Other DBs
NCBI-ProteinID: AXP09238
UniProt: A0A6A7JSK6
LinkDB
Position
1241783..1243771
AA seq 662 aa
MNMDENKKINNEQNPNSSSKNNRRYKYKNHRKKILDSLQNENDKSKIHAAQNANKENLEN
KSEKKKKKNRNLPSKLTGNEDWQIALAESIEANRVSHENRLHPLKYNNSSEHKIRITPLG
GLGEIGGNIAVFETNKDAIIIDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHA
HEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKTERKWFRPVEKRRIYEIGEFD
IEWMHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLL
SDSTNSYKEGYTKSESSVGPTFDRIFSRSKGRVIMSTFSSNIHRVYQAISYGLKYGRKVC
VIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMAT
DEHKFIKIKPTDQIIISAKAIPGNEGSVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEE
QKLMLVLTKPKFFLPVHGEYNHINKHKETAIKCGVPERNIYLMSDGDQVELCQKYIKRVK
TVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKATKTLINKPRVFSYGLVA
DKHDHAFSKDMAEVLGQFFINIKDEVLNDPKFLENQIRQVLRKHIFRKIKKYPTIVPTIF
MM
NT seq 1989 nt   +upstreamnt  +downstreamnt
atgaatatggacgagaataaaaaaataaataacgaacaaaatccaaactcaagttcaaag
aacaacagacgttataaatacaaaaaccatagaaaaaaaatactcgattctttacaaaat
gaaaacgataagtcaaaaattcatgcagctcaaaatgcaaataaagaaaatcttgaaaat
aaaagcgagaaaaaaaagaaaaaaaatcgcaatcttccttctaagcttacaggaaatgaa
gactggcaaatcgctcttgcagagtctatagaagctaatcgtgtttcacatgaaaaccgc
ttgcaccctttaaaatacaataattctagcgaacataaaattcgtattactcctcttgga
ggtttgggtgaaatcggtggaaatattgctgtttttgaaactaataaagatgctattatt
atagatattggtatgagttttccagatggaacaatgcatggggttgatattatcatacct
gattttgattatgtaagaaagatcaaagataaaattcgtggtattgttattacccatgcg
catgaagatcatataggtgcagtgccttatttttttaaagaattccaattccctatttat
gcaacccctttagctttgggtatgatttcaaataaatttgaagaacatggtttaaaaaca
gaacgcaaatggtttcgtcctgtagaaaaacgccgtatttatgaaataggagaatttgat
atagaatggatgcatattactcattctattatcgatgcttctgctttggctattaaaaca
aaagcaggaactattatccacacaggagattttaaaatagatcaaaccccaatcgatggc
tatccaacagatttaggacgcttagctcactatggagaagaaggagttttatgcctttta
agtgatagtactaattcttataaagaaggttatactaaaagtgaaagttctgtaggacca
acttttgatcggattttttcgcgatctaaaggcagagtgattatgagtacttttagttct
aatatccaccgcgtttatcaagccattagctatggattaaaatacggtagaaaagtatgt
gttattggtagatccatggaaagaaatttatacactactatggagttaggttatattaaa
cttgataggaaaatttttattgatgcagatgaggtaagtaagtataaagataatgaagtg
cttatagtgactacaggaagtcaaggtgaaaccatgagtgcactttatagaatggctaca
gatgagcacaaatttataaaaataaaacctacagatcaaattatcatttcagctaaagcc
atacctggtaatgaaggaagtgtttctgcggtgcttgattatcttttaaaagcaggtgct
aaagttgcttatcaagaatttagtgaaattcatgtaagtggtcatgcaagtatagaagag
caaaaacttatgcttgttcttactaaaccaaaatttttcttacctgtacatggagagtat
aaccatatcaacaaacataaagaaacagctataaaatgtggcgttcctgaaagaaatatt
tatcttatgagtgatggagatcaagtagaactttgtcaaaaatacattaaaagagttaaa
actgttaaaacaggtaaggtttttgtagataatcaaatcaataaacaaattgccgatgat
gtggttattgatcgtcaaaaacttgcagatagtggtatagttgtgattattgctcaactt
gataaagctacaaaaacattaattaataagcctagggtatttagttatggtcttgtggct
gataaacacgaccatgcttttagtaaagatatggcagaagttttagggcaattttttatt
aatattaaagatgaagttttaaatgatccaaaatttttagaaaatcaaatacgtcaagtt
ttaagaaaacatatttttagaaagattaaaaaatacccaactatagttccaaccattttt
atgatgtaa

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