Campylobacter hepaticus: A2J15_006055
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Entry
A2J15_006055 CDS
T05589
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
chw
Campylobacter hepaticus
Pathway
chw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A2J15_006055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chw03019
]
A2J15_006055
Messenger RNA biogenesis [BR:
chw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A2J15_006055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AXP09238
UniProt:
A0A6A7JSK6
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All DBs
Position
1241783..1243771
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AA seq
662 aa
AA seq
DB search
MNMDENKKINNEQNPNSSSKNNRRYKYKNHRKKILDSLQNENDKSKIHAAQNANKENLEN
KSEKKKKKNRNLPSKLTGNEDWQIALAESIEANRVSHENRLHPLKYNNSSEHKIRITPLG
GLGEIGGNIAVFETNKDAIIIDIGMSFPDGTMHGVDIIIPDFDYVRKIKDKIRGIVITHA
HEDHIGAVPYFFKEFQFPIYATPLALGMISNKFEEHGLKTERKWFRPVEKRRIYEIGEFD
IEWMHITHSIIDASALAIKTKAGTIIHTGDFKIDQTPIDGYPTDLGRLAHYGEEGVLCLL
SDSTNSYKEGYTKSESSVGPTFDRIFSRSKGRVIMSTFSSNIHRVYQAISYGLKYGRKVC
VIGRSMERNLYTTMELGYIKLDRKIFIDADEVSKYKDNEVLIVTTGSQGETMSALYRMAT
DEHKFIKIKPTDQIIISAKAIPGNEGSVSAVLDYLLKAGAKVAYQEFSEIHVSGHASIEE
QKLMLVLTKPKFFLPVHGEYNHINKHKETAIKCGVPERNIYLMSDGDQVELCQKYIKRVK
TVKTGKVFVDNQINKQIADDVVIDRQKLADSGIVVIIAQLDKATKTLINKPRVFSYGLVA
DKHDHAFSKDMAEVLGQFFINIKDEVLNDPKFLENQIRQVLRKHIFRKIKKYPTIVPTIF
MM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggacgagaataaaaaaataaataacgaacaaaatccaaactcaagttcaaag
aacaacagacgttataaatacaaaaaccatagaaaaaaaatactcgattctttacaaaat
gaaaacgataagtcaaaaattcatgcagctcaaaatgcaaataaagaaaatcttgaaaat
aaaagcgagaaaaaaaagaaaaaaaatcgcaatcttccttctaagcttacaggaaatgaa
gactggcaaatcgctcttgcagagtctatagaagctaatcgtgtttcacatgaaaaccgc
ttgcaccctttaaaatacaataattctagcgaacataaaattcgtattactcctcttgga
ggtttgggtgaaatcggtggaaatattgctgtttttgaaactaataaagatgctattatt
atagatattggtatgagttttccagatggaacaatgcatggggttgatattatcatacct
gattttgattatgtaagaaagatcaaagataaaattcgtggtattgttattacccatgcg
catgaagatcatataggtgcagtgccttatttttttaaagaattccaattccctatttat
gcaacccctttagctttgggtatgatttcaaataaatttgaagaacatggtttaaaaaca
gaacgcaaatggtttcgtcctgtagaaaaacgccgtatttatgaaataggagaatttgat
atagaatggatgcatattactcattctattatcgatgcttctgctttggctattaaaaca
aaagcaggaactattatccacacaggagattttaaaatagatcaaaccccaatcgatggc
tatccaacagatttaggacgcttagctcactatggagaagaaggagttttatgcctttta
agtgatagtactaattcttataaagaaggttatactaaaagtgaaagttctgtaggacca
acttttgatcggattttttcgcgatctaaaggcagagtgattatgagtacttttagttct
aatatccaccgcgtttatcaagccattagctatggattaaaatacggtagaaaagtatgt
gttattggtagatccatggaaagaaatttatacactactatggagttaggttatattaaa
cttgataggaaaatttttattgatgcagatgaggtaagtaagtataaagataatgaagtg
cttatagtgactacaggaagtcaaggtgaaaccatgagtgcactttatagaatggctaca
gatgagcacaaatttataaaaataaaacctacagatcaaattatcatttcagctaaagcc
atacctggtaatgaaggaagtgtttctgcggtgcttgattatcttttaaaagcaggtgct
aaagttgcttatcaagaatttagtgaaattcatgtaagtggtcatgcaagtatagaagag
caaaaacttatgcttgttcttactaaaccaaaatttttcttacctgtacatggagagtat
aaccatatcaacaaacataaagaaacagctataaaatgtggcgttcctgaaagaaatatt
tatcttatgagtgatggagatcaagtagaactttgtcaaaaatacattaaaagagttaaa
actgttaaaacaggtaaggtttttgtagataatcaaatcaataaacaaattgccgatgat
gtggttattgatcgtcaaaaacttgcagatagtggtatagttgtgattattgctcaactt
gataaagctacaaaaacattaattaataagcctagggtatttagttatggtcttgtggct
gataaacacgaccatgcttttagtaaagatatggcagaagttttagggcaattttttatt
aatattaaagatgaagttttaaatgatccaaaatttttagaaaatcaaatacgtcaagtt
ttaagaaaacatatttttagaaagattaaaaaatacccaactatagttccaaccattttt
atgatgtaa
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