KEGG   Capra hircus (goat): 100860938
Entry
100860938         CDS       T02910                                 
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
  KO
K19720  collagen type III alpha
Organism
chx  Capra hircus (goat)
Pathway
chx04611  Platelet activation
chx04820  Cytoskeleton in muscle cells
chx04926  Relaxin signaling pathway
chx04933  AGE-RAGE signaling pathway in diabetic complications
chx04974  Protein digestion and absorption
chx05146  Amoebiasis
chx05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:chx00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    100860938 (COL3A1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    100860938 (COL3A1)
  09152 Endocrine system
   04926 Relaxin signaling pathway
    100860938 (COL3A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    100860938 (COL3A1)
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    100860938 (COL3A1)
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    100860938 (COL3A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    100860938 (COL3A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:chx00536]
    100860938 (COL3A1)
Glycosaminoglycan binding proteins [BR:chx00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   100860938 (COL3A1)
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 100860938
NCBI-ProteinID: XP_005675926
UniProt: A0AAJ6WIA3
LinkDB
Position
2:129111216..129151444
AA seq 1467 aa
MMSFVQKGTWLLFALLHPTVILAQQEAVDGGCSHLGQAYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGQGPQGPKGDPGPPGIPGRN
GDPGPPGSPGSPGSPGPPGICESCPTGSQNYSPQYEAYDVKSGVAGGVGLAGYPGPAGPP
GPPGPPGTSGHPGAPGAPGYQGPPGEPGQAGPAGPPGPPGAIGPSGPAGKDGESGRPGRP
GERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGIPGENGAPGPM
GPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSP
GSSGAPGQRGEPGPQGHAGAPGPPGPPGSNGSPGGKGEMGPAGIPGAPGLLGARGPPGPP
GTNGAPGQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLP
GAAGERGVPGFRGPAGANGLPGEKGPPGERGGPGPAGPRGVAGEPGRDGLPGGPGLRGIP
GSPGGPGSDGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGP
GGPGPQGPAGKNGETGPQGPPGPTGPSGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEP
GPKGEAGAPGIPGGKGDSGAPGERGPPGAGGPPGPRGGAGPPGPEGGKGAAGPPGPPGSA
GTPGLQGMPGERGGPGGPGPKGDKGEPGTSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDK
GEGGAPGVPGIAGPRGGPGERGEPGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGPP
GAAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGGRGPPGPPGSNGNPGPPGSSGAP
GKDGPPGPPGSNGAPGSPGISGPKGDAGQPGERGAPGPQGPPGAPGPLGIAGLTGARGLA
GPPGMPGARGSPGPQGIKGENGKPGPSGQNGERGPPGPQGLPGLAGAAGEPGRDGNPGSD
GLPGRDGAPGTKGDRGENGSPGAPGAPGHPGPPGPVGPAGKNGDRGETGPAGPSGAPGPA
GSRGAPGPQGPRGDKGETGERGANGIKGHRGFPGNPGAPGSPGPAGHQGAVGSPGPAGPR
GPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGA
GGVAAISGIGGEKAGGFAPYYGDEPIDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPA
RNCRDLKFCHPELQSGEYWVDPNQGCKLDAIKVYCNMETGETCISASPLTIPRKNWWTDS
GAEKKHVWFGESMEGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYM
DHASGNVKKALRLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWGKTVFQYQTRKAVRL
PIVDIAPYDIGGPDQEFGADIGPVCFL
NT seq 4404 nt   +upstreamnt  +downstreamnt
atgatgagctttgtgcaaaaggggacctggttacttttcgctctgcttcatcccactgtt
attttggcacaacaggaagctgttgacggaggatgctcccatctcggtcaggcctatgca
gatagagatgtatggaaaccagaaccgtgccaaatatgcgtctgcgactcaggatccgtt
ctctgtgatgacataatatgtgacgaccaagaattagactgtcccaaccctgaaatcccg
tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctaat
ggtcaaggacctcaaggccccaagggagatccaggtcctcctggtattcctgggcgaaat
ggtgatcctggtcctccaggatcaccaggttccccaggttctcctggccctcctggaatc
tgtgaatcatgtcctactggtagccagaactattctccccagtacgaagcatatgatgtc
aagtctggagtagcaggaggagtaggactcgcaggctatcctgggccagctggtcctcct
ggcccacccggaccccctggcacatctggtcaccctggtgcccctggcgctccaggatac
caaggtccccccggtgaacctgggcaagctggtcctgcaggtcctccgggacctcctggt
gctataggtccatctggccctgctggaaaagatggggaatcaggaagacccggacgacct
ggagagcgaggattacctggtcctcctggtatgaaaggcccagctggtatgcctggattt
cctggtatgaaaggacatagaggctttgatggacgaaatggagagaaaggagaaactggt
gctcctggattaaagggggaaaatggcattccaggtgaaaatggagctcctggacccatg
ggtccaagaggagctcctggtgagagaggacggccaggacttcctggagccgcaggggct
cgtggtaatgatggagctcgaggaagtgatggacaaccgggcccccctggtccccctgga
actgcaggattccctggttcccctggtgctaagggtgaagttggacctgcaggatctcct
ggttcaagcggtgcccctggacaaagaggagaacctggacctcagggacatgctggtgct
ccaggtccccctgggcctcctgggagtaatggtagtcctggtggcaaaggtgaaatgggt
cctgctggcattcctggagctcctgggctgttaggagctcgtggtcctccagggccacct
ggcaccaatggtgctcctgggcaacgaggtgctgcaggtgaacccggtaagaatggagcc
aaaggagatccaggaccacgtggggaacggggagaagctggttctccaggtattccagga
cctaagggtgaagatggcaaagatggttctcctggagaacctggtgcaaacggacttcct
ggagctgcaggagaaaggggtgtgcctggattccgaggacctgctggagcaaatggcctt
ccaggagaaaagggtcctcctggggagcgtggtggcccaggccccgcagggcccagagga
gttgctggagagcctggacgagatggcctccctggaggtccaggattgaggggtattccc
ggtagccccggaggaccaggcagtgatgggaaaccagggcctcctggaagccaaggagag
actggtcgacctggtcctccaggttctcctggtccgcgaggtcagcctggcgtcatgggc
ttccctggtcccaaaggaaatgatggtgctcctggaaaaaatggagaacgaggtggccct
ggaggtcctggccctcagggtcctgctggaaagaatggtgagaccggacctcagggtcct
ccaggacctactggcccttctggtgacaaaggagacacaggaccccctggtccacaagga
ctacaaggcttgcctggaacaagtggtcctccaggagaaaatggaaaacctggtgaacct
ggtccaaagggtgaggctggtgcacctggaattccaggaggcaagggtgattctggtgct
cccggtgaacgtggacctcctggagcaggagggccccctggacctagaggtggagctggc
ccccctggtcccgaaggaggaaagggtgctgctggtccccctgggccacctggttctgct
ggtacacctggtctgcaaggaatgcctggagaaagagggggtcctggaggccctggtcca
aagggtgacaagggtgagcctggcacttcaggtgtcgatggtgctccagggaaagatggt
ccaaggggtcccactggtcccattggtcctcctggtccagctggtcagcctggagataag
ggtgaaggtggtgcccctggagttccgggtatagctggtcctcgcggtggccctggtgag
agaggcgaaccggggccaccaggacctgctggcttccctggtgctcctggccagaacggt
gagcctggtgctaaaggagaaagaggggctcctggtgagaaaggtgaaggaggccctcct
ggagccgcaggaccccctggaggttctgggcctgctggtcccccgggcccccaaggtgtc
aaaggtgaacgtggcagtcctggtggtcctggtgctgctggcttccccggtggtcgtggt
cctcctggtcctcctggcagtaatgggaacccaggccccccaggctccagcggggctcca
ggcaaagatggccccccaggtccacctggtagtaatggtgctcctggcagccctgggatc
tctggaccaaagggtgatgctggtcaaccaggtgagaggggagcacctggcccccagggc
cctccgggagctccaggcccactcggaattgcaggacttactggagcacgaggtcttgca
ggcccaccaggcatgccaggtgctaggggcagccccggcccacagggcatcaagggtgaa
aatggtaaaccaggacctagtggtcaaaacggagaacgtggtcctcctggcccccagggt
cttcctggtctggctggtgcagctggtgaacctggaagagatggaaaccctggatcagat
ggtctgccaggccgagatggagctccaggtaccaagggtgaccgtggtgagaacggctct
cctggtgcccctggagctcctggtcacccaggccctcctggtcctgtcggtccagctgga
aagaatggtgacagaggagaaactggccctgctggtccttctggggccccaggtcctgct
ggatcaagaggtgctcctggtccccaaggcccacgtggtgacaaaggtgaaactggtgag
cgtggtgctaacggcatcaaaggacatcgcggattccctggcaacccaggggcccccgga
tctccaggtcccgctggtcaccaaggtgcagtcggcagtccaggccctgcaggccccaga
ggacctgttggacccagtgggccccctggcaaggatggaacaagtggacaccctggtccc
attggaccaccggggcctcgaggtaacagaggtgaaagaggatctgagggctccccaggc
cacccaggacaaccaggccctcctggacctcctggtgcccctggtccatgttgtggtgct
ggcggggttgctgccatctctggcattggaggagaaaaagctggtggttttgccccgtat
tatggagatgaaccgatagatttcaaaatcaacaccgatgagattatgacctcactcaaa
tcagtcaatggacaaatagaaagcctcattagtcccgacggttcccgtaaaaaccctgct
cggaactgcagagacctgaaattctgccatcctgaactccagagtggagaatattgggtg
gatcctaaccaaggttgcaaattggatgctattaaagtctactgtaacatggaaactggg
gaaacatgcataagcgccagtcctttgactatcccacggaagaactggtggacagattct
ggtgctgagaagaaacatgtttggtttggagaatccatggagggtggttttcagtttagc
tatggcaatcctgaacttcccgaagatgtcctggacgtccagctggcgttcctccgactt
ctctccagccgggcctctcagaacatcacatatcactgcaagaacagcatcgcatacatg
gatcatgccagtgggaatgtaaagaaagccttaaggctgatggggtcaaatgaaggtgaa
ttcaaggctgaaggaaatagcaaattcacatacacagttctggaggatggttgcacaaaa
cacactggggaatggggcaaaacagtcttccagtatcaaacacgcaaggccgtcagacta
cctattgtagacattgcaccctatgatattggtggtcctgatcaagaatttggtgcggac
attggccctgtttgctttttataa

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