Capra hircus (goat): 100860940 Help Entry 100860940         CDS       T02910                                  Symbol COL1A2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism chx  Capra hircus (goat) Pathway chx04151   PI3K-Akt signaling pathway chx04510   Focal adhesion chx04512   ECM-receptor interaction chx04611   Platelet activation chx04820   Cytoskeleton in muscle cells chx04926   Relaxin signaling pathway chx04933   AGE-RAGE signaling pathway in diabetic complications chx04974   Protein digestion and absorption chx05146   Amoebiasis chx05165   Human papillomavirus infection chx05205   Proteoglycans in cancer chx05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:chx00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     100860940 (COL1A2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100860940 (COL1A2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100860940 (COL1A2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100860940 (COL1A2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     100860940 (COL1A2)   09152 Endocrine system    04926 Relaxin signaling pathway     100860940 (COL1A2)   09154 Digestive system    04974 Protein digestion and absorption     100860940 (COL1A2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     100860940 (COL1A2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100860940 (COL1A2)   09174 Infectious disease: parasitic    05146 Amoebiasis     100860940 (COL1A2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     100860940 (COL1A2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     100860940 (COL1A2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:chx00536]     100860940 (COL1A2) Glycosaminoglycan binding proteins [BR:chx00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100860940 (COL1A2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  100860940 NCBI-ProteinID:  XP_005678993 LinkDB All DBs Position 4:complement(108819725..108857001) Genome browser AA seq 1364 aa AA seqDB search MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPSGDRGPRGERGPPGPPGRDGDDGIPG PPGPPGPPGPPGLGGNFAAQFDGKGGGPGPMGLMGPRGPPGASGAPGPQGFQGPPGEPGE PGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGH NGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGP VGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPVGPPGNPGA NGLPGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGE PGAVGQPGPPGPSGEEGKRGSTGEIGPAGPPGPPGLRGNPGSRGLPGADGRAGVMGPAGS RGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGSPGNIGPAGKEGPAGLPGIDGRPGPIGP AGARGEPGNIGFPGPKGPTGDPGKAGEKGHAGLAGPRGAPGPDGNNGAQGPPGLQGVQGG KGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGIPGEFGLPGPAGARGERGPPGESGAAGP TGPIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGL RGDVGSPGRDGARGAPGAVGAPGPAGANGDRGEAGPAGPAGPAGPRGSPGERGEVGPAGP NGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGAAGPSGPNGPPGPAGSRGDGGP PGATGFPGAAGRTGPPGPAGISGPPGPPGPAGKEGLRGPRGDQGPVGRTGEPGAAGPPGF VGEKGPSGEPGTAGPPGTPGPQGFLGPPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGP PGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPVGAAGA PGPQGPVGPTGKHGSRGEPGPVGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGL KGHNGLQGLPGLAGHHGDQGAPGAVGPAGPRGPAGPTGPAGKDGRTGQPGAVGPAGIRGS QGSQGPAGPPGPPGPPGPPGPSGGGYDFGFDGDFYRADQPRSPASLRPKDYEVDATLKSL NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGET CIRAQPEDIPVKNWYRNSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLLAN HASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTN EWKKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCFK NT seq 4095 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacttcgtgcctagca acatgccaatccttacaagaggcaactgcaagaaagggcccaagtggagatagaggacca cgcggagaaaggggtccaccaggcccaccaggcagagatggtgatgacggcatcccaggc cctcctggtccccctggccctcctggcccccctggtcttggcgggaactttgctgctcag tttgatggaaaaggaggtggccctggaccaatggggctgatgggacctcgcggccctcct ggtgcctctggagcccctggcccacaaggtttccagggacctcctggtgagcctggtgaa cctggtcagactggtcctgctggtgctcgtggcccacctggccctcctggcaaggctggt gaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgttggaccacag ggtgctcgtggctttcctggaactcctggactccctggcttcaagggcattaggggtcac aacggtctggatggattgaagggacagcctggtgccccaggtgtgaagggtgaacctggt gcccctggtgaaaatggaactccaggtcaaacgggagcccgcggtcttcctggtgagaga ggacgtgttggtgcccctggcccagctggtgcccgtggaagtgatggaagtgtgggtcct gtgggccctgctggtcccattgggtctgccggccctccaggcttcccaggtgctcctggc cccaagggtgaacttggacctgttggtaaccctggccctgctggtcccgcgggtccccgt ggtgaagtgggtcttccaggcctttctggccctgttggacctcctggcaaccccggagcc aatgggcttcctggtgctaagggtgctgctggccttcccggtgttgctggggctcccggc ctccctggaccccggggtattcctggccctgttggtgctgccggagctactggcgccaga ggacttgttggtgagcccggcccagctggttcgaaaggagagagtggcaacaagggagag cctggcgctgttggacagccaggtcctcctggccccagtggtgaagaaggaaagagaggc tccactggagaaatcggacccgctggccccccaggacctcctgggctgaggggaaatcca ggctcccgtggtctgcctggagctgacggcagagctggtgtcatgggccctgctggtagc cgtggtgcaactggccctgctggtgtgcgaggccccaatggagattctggtcgccctgga gagcctggcctcatgggaccccgaggtttcccaggttcccctggaaatattggcccagct ggtaaagaaggtcctgcgggtctccctggtattgatggcagacctggacccattggccca gctggagcaagaggagagcctggcaacattggattccctggacccaaaggccccactggt gatcctggcaaagctggtgaaaaaggtcatgctggtcttgctggccctcggggtgctcca ggtcctgatggcaacaatggtgctcagggaccccctggactacagggtgtccaaggtgga aagggtgaacaaggtcctgctggtcctccaggcttccagggtctgcctggccctgcaggc acagctggtgaagctggcaaaccaggagaaaggggtatccctggtgaatttggtctccct ggccctgctggtgcaagaggcgagcgtgggcccccaggtgaaagtggtgctgccgggcct actgggcctattggaagccgaggtccttctggacccccagggcctgatgggaacaagggc gaaccgggtgtggttggtgctccaggcactgctggtccatctggtcctagtggactccca ggagagaggggtgcggccggcattcctggaggcaagggagaaaagggtgaaactggtctc agaggtgacgttggtagccctggcagagatggtgctcgtggtgctcccggcgctgttggt gctcctggccctgctggagccaacggggaccggggtgaagctggtcccgccggccctgct ggccctgctggtcctcgtggtagccctggtgaacgtggtgaggttggtcccgctggcccc aacggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggggagagagga accaaaggacccaagggtgaaaatggtcctgttggtcccacaggccccgttggagctgct ggtccgtctggtccaaatggcccacctggtcctgctggaagtcgtggtgatggagggccc cctggggctactggtttccctggtgctgctggacggactggtccccctggacccgctggt atctctggcccccctggcccccctggtcctgctggtaaagaagggctccgtgggcctcgt ggagaccaaggtccagttggtcgaactggagagccaggtgccgctggccctcctggcttt gttggtgagaagggtccctctggagagcctggtactgctggacctcctggaaccccaggg ccacaaggttttcttggccctcctggttttctgggtctcccgggctccagaggtgagcgt ggtctaccaggtgtcgctggatctgtgggtgaacctggccccctcggcattgcaggccca cctggggcccgtggtccccctggtaatgtcggtaatcctggcgtcaatggtgctcctggt gaagctggtcgtgacggcaaccctgggaatgacggtcccccaggccgcgatggtcaaccc ggacacaagggggagcgtggttaccccggtaatgcgggtcctgttggtgctgctggtgct cctggccctcaaggccccgtgggtcccactggtaaacacggaagccgtggtgaaccgggt cctgtcggtgctgttggtcctgctggtgctgttggcccaagaggtcccagtggcccacaa ggtattcgaggtgacaagggagagcctggtgacaagggtcccagaggtcttcctggctta aagggacacaatgggttgcaaggtcttccgggtcttgctggtcatcacggcgatcaaggt gcccccggtgctgtgggtcccgctggtcctaggggccctgctggtcctactggccccgct ggcaaagatggtcgcactggacagcctggtgcagtcggacctgctggcattcgtggttct cagggtagccaaggtcctgctggccctcctggtccccccggccctcctggacctcctggc ccaagtggtggtggttacgactttggttttgatggagacttctacagggctgaccagcct cgctcaccagcttctctcagacccaaggattatgaagttgatgctactctgaaatctctc aacaaccagattgagacccttcttactccagaaggctctaggaagaacccagctcgcaca tgccgagacttgagactcagccacccagaatggagcagtggttactactggattgaccct aaccaaggatgtactatggatgctatcaaagtatactgtgatttctctactggcgaaacc tgcatccgggctcaacctgaagacatcccagtcaagaactggtacagaaattccaaggcc aagaagcatgtctgggtaggagaaactatcaatggtggcacccagtttgaatacaatgtt gaaggagtaaccaccaaggagatggctacccagcttgccttcatgcgtctgctggccaac catgcctctcagaacatcacctaccattgcaagaacagcattgcatacatggatgaggag actggcaacctgaaaaaggctgtcattctgcaaggatccaatgatgtcgaacttgttgcc gagggcaacagcagattcacctacactgttcttgtagatggctgctctaaaaagacaaat gaatggaagaagacaatcattgagtataaaacaaacaagccatctcgcctgcctatcctt gatattgcacctttggacatcggtggcgctgaccaagaaatcagattgaacattggcccg gtctgtttcaaataa

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