Capra hircus (goat): 100860983
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Entry
100860983 CDS
T02910
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
chx
Capra hircus (goat)
Pathway
chx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100860983 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
chx03041
]
100860983 (DHX16)
Enzymes [BR:
chx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100860983 (DHX16)
Spliceosome [BR:
chx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
100860983 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_19
AAA_30
SecA_DEAD
Flavi_DEAD
nSTAND3
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
100860983
NCBI-ProteinID:
XP_017894343
LinkDB
All DBs
Position
23
Genome browser
AA seq
1045 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYMLLEDSEESSEETVSRAGSSVQK
KRKKRKHLRKKREEEEEDEEEEQVSEKGKRKTGEKKEQTEKPESEDEWERTERERLQDLE
ERDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLA
KREREKLEDLEAELADEEFLFGDVELSRHERRELRYKRRVRDLAREYRAAGEQEKLEATN
RYHMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLV
LEEEETIEFVRATQLQGDEEPSAPPAPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQ
VLIIEGETGSGKTTQIPQYLFEEGYTRKGMKIACTQPRRVAAMSVAARVAREMGVKLGNE
VGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLI
KDVARFRPELKVLVASATLDTARFSTFFDDAPIFRIPGRRFPVDIFYTKAPEADYLEACV
VSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQ
ARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSK
ASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLM
HFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSC
SEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQ
WCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTR
SGYRTVKQQQTVFIHPNSSLFEEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYY
KAKELEDPHAKKMPKKIGKTREELG
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccggcggggctggagcgctgggtgcaagacgagctgcactcggtgctggga
ctgagcgagcggcacgtggcccagttcttgatcggtaccgcgcagcgctgtgcctcggca
gaggagttcgtgcagcgcttgcgagacaccgataccctggacctcagtgggccggcccgg
gacttcgccctgagactctggaacaaggtcccacggaaggcagtggtggaaaagccagct
cgggcagccgagcgagaggcccgagccctgctggaaaagaaccgctcttatatgttgttg
gaggacagtgaggagagcagcgaggagactgtgagcagggctgggagcagtgtccagaag
aagcggaaaaaacggaaacacctcaggaagaaacgtgaggaggaagaggaagacgaggag
gaggaacaagtttctgagaaaggaaagaggaagacaggggagaagaaagagcagacggaa
aagccggagtcggaggatgagtgggagcggacagagcgagagcgccttcaggacctggag
gaacgcgatgcattcgctgagcgggttcggcagcgggacaaggatcggactcgcaacgtc
ctggagcggtcagacaagaaggcttacgaagaggctcagaagcgcctcaagatggctgag
gaagaccggaaagccatggtccctgagctgaggaagaaatcccgccgagagtacctggcc
aagcgggagcgagagaagctggaagacctggaggccgagctggcggacgaggagttcctc
ttcggggatgtggagctgagccgacacgagcgccgggagctcaggtacaagcggcgtgtg
cgggatctggcccgggagtaccgggcggctggggagcaggagaagctggaagccaccaat
cgctaccacatgcccgaggagacccgaggacagcctgcacgtgcagtggatctagtggag
gaggagtccggcgcccctggggaggagcagcggcgctgggaggaggcccggctcggggca
gcatccctgaagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtg
ctggaggaggaggagaccattgagtttgtccgggccactcagctccagggcgatgaggag
ccgtcggccccgcccgcccccactcaggcccagcagaaggagtccatccaggccgtgcgc
cgcagccttcctgtgttcccgttccgcgaggagctcctggctgctattgcgaaccatcag
gtcctcatcatcgaaggcgagacgggctcgggcaagaccacccagatcccacagtacctc
tttgaggagggttacacaaggaagggtatgaagatcgcctgtacccagccccggcgagtg
gcagccatgagtgtggctgcccgagtggcccgggagatgggtgtgaagcttggcaatgag
gtcggctacagcatccgcttcgaggactgcacgtcagagcgaaccgtcctgcgctacatg
acggatgggatgcttctccgggagttcctctctgagcctgaccttgcgagttacagcgtg
gtgatggtggatgaggcccacgaacggaccctgcacacagacattctctttggcttgatc
aaggacgttgcgcggttccgacctgagctcaaggtcctggtggcttcagccacactggac
acggcccgcttttccaccttcttcgatgacgcccccatcttccgaatccctggacgcagg
tttccagttgacatcttctacaccaaggctccggaggcggactacctggaggcctgtgtg
gtgtccgtgctgcagatccacgtgactcagccccccggggacatcctggtgttcctgaca
ggacaggaggagattgaggctgcctgcgagatgctccaggatcgctgccgccgcctgggc
tccaagatccgggagctcctggtgctgcccatttatgccaacctgccttctgacatgcag
gcgcggatcttccagcccacgcccccaggggcacggaaggtggttgtggcaaccaatatt
gctgagacctcgctcaccattgagggcatcatttacgtgctggatccagggttctgtaag
cagaagagctacaacccccgcacaggcatggaatcactcactgtcacaccctgcagcaag
gcctctgccaatcagcgagctggccgggcgggtcgggtggctgcagggaagtgcttccgc
ctgtatactgcctgggcttaccagcacgagctggaggaaaccacggtgcctgagattcag
aggaccagcctgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatg
cactttgatttcctggaccccccaccatatgagaccctgctgctggctctggagcagctg
tatgcgctaggagccctcaaccaccttggggagctcaccacgtctggtcgaaagatggca
gagctgcctgtggaccccatgctgtctaaaatgatcctggcctctgagaagtacagctgt
tcagaggagatcctgacagtggctgccatgctctctgtcaacaactccatcttctaccga
cctaaggacaaggtcgtccatgctgacaacgctcgggtcaacttcttcctccctggtggg
gaccacctggttctgctgaatgtttatacacagtgggctgagagtggttactcttcccag
tggtgctatgagaactttgttcagttcagatccatgcgccgagcccgggatgtgcgggag
cagctggaagggctcttggaacgtgtggaagttggtctcagttcctgccaaggggactac
atccgtgtccgaaaggccatcactgctggctacttctaccacacagcacggttgacacgc
agcggctaccgcacagtcaaacagcagcagacagtgttcattcatcccaactcttccctc
tttgaggaacagccacgctggctgctctaccatgaacttgtcttgaccaccaaagagttc
atgagacaggtattagagattgagagcagttggcttctcgaagtggcgccccactattac
aaggccaaggagttagaagatccccatgctaagaaaatgcccaaaaaaataggcaagaca
cgggaagagctagggtga
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