Capra hircus (goat): 100861034
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Entry
100861034 CDS
T02910
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
chx
Capra hircus (goat)
Pathway
chx04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100861034 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
100861034 (RABGEF1)
Membrane trafficking [BR:
chx04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100861034 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
100861034 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
100861034
NCBI-ProteinID:
XP_017896106
EnsemblRapid:
ENSCHIG00000014029
LinkDB
All DBs
Position
25:28051288..28099291
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AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGAKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLEAMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPDACLGVKQMYKNLDLLSQ
LNERQERIMNEAKKLEKDLIDWTDGITKEVQDIVEKYPLEIRPPNQSVAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgaggaattcatgtggatcagtcggagctgctatgcaag
aaaggatgtggttactacggcaaccctgcttggcagggtttctgctccaagtgctggaga
gaggagtatcacaaagccaggcagaagcagattcaggaggattgggaactggcagagcga
ctgcagcgggaggaagaagaggcctttgccagcagtcagagcagccaaggggcccaatcc
ctcactttttccaagtttgaagagaagaaaaccaatgagaagacccgcaaggttaccaca
gtgaagaaattcttcagtgcttcatcccgggttggagcaaagaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgaaacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagctgtttttggaagcaatgcattacaaaagggacttaagcattgaggagcagtca
gagtgtactcaggatttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtg
cctccagaaagagttgagaagataatggatcagattgaaaagtacatcatgactcgtctc
tataaatacgtgttctgtccagaaactactgatgatgagaagaaagatcttgctattcag
aagaggatcagagccctgcactgggttacacctcagatgctttgtgtccctgttaatgaa
gaaattccagaagtgtctgatatggtggtgaaagcaattacagatatcattgagatggat
tcgaagcgcgtgccccgggataagttggcctgcatcaccaagtgcagcaagcacatcttc
aatgccatcaagatcaccaagaacgagccggcttcagccgatgacttcttacccacactc
atctacattgtcttgaagggcaaccccccacgccttcagtccaacatccagtacatcacc
cgcttctgcaacccaagccgactgatgacgggcgaggatggctactatttcaccaatctg
tgctgtgccgtggctttcattgagaaattagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtctggccagacttctcccaggaagcaggaatctgagagttgg
tctcctgatgcttgcttaggtgtgaagcagatgtataagaatttggacctcctgtctcag
ttgaatgaacgacaggaaaggattatgaatgaagccaagaaacttgagaaagacctcata
gattggacggatggaatcacaaaagaggttcaagacattgttgagaaatacccacttgaa
attagacccccaaatcaatctgtagcggctattgactctgaaaatgttgaaaatgataaa
cttcctccaccgttgcaacctcaagtttatgcaggatga
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