Capra hircus (goat): 100861305
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Entry
100861305 CDS
T02910
Symbol
RORA
Name
(RefSeq) nuclear receptor ROR-alpha
KO
K08532
RAR-related orphan receptor alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04659
Th17 cell differentiation
chx04710
Circadian rhythm
chx05017
Spinocerebellar ataxia
chx05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100861305 (RORA)
09159 Environmental adaptation
04710 Circadian rhythm
100861305 (RORA)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
100861305 (RORA)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100861305 (RORA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
100861305 (RORA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
chx03310
]
100861305 (RORA)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100861305 (RORA)
Nuclear receptors [BR:
chx03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100861305 (RORA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100861305
NCBI-ProteinID:
NP_001272581
UniProt:
E2GIP6
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All DBs
Position
10:complement(53429434..54236706)
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AA seq
468 aa
AA seq
DB search
MMYFVIAAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFCRRSQQSNATYSCPRQKNC
LIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDHQQQ
PGEAEPLTPTYSISANGLTELHDDLSNYIDGHTPEGSKADSAVSSFYLDIQPSPDQSGLD
INGIKPEPICDYTPASGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHLETCQYLREEL
QQITWQTFLQEEIENYQNKQREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVL
LKAGSLEVVFIRMCRAFDSQNNTVYFDGKYASPDVFKSLGCEDFISFVFEFGKSLCSMHL
TEDEIALFSAFVLMSADRSWLQEKVKIEKLQQKIQLALQHVLQKNHREDGILTKLICKVS
TLRALCGRHTEKLMAFKAIYPDIVRLHFPPLYKELFTSGFEPAMQIDG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtattttgtgatcgcagcgatgaaagctcaaattgaaattattccatgcaagatc
tgtggagacaaatcatcaggaatccattacggtgtcattacatgtgaaggctgcaagggc
ttttgcaggagaagtcagcaaagcaatgccacctactcctgtcctcgtcaaaagaactgt
ttgattgatcgaaccagtagaaaccgctgccagcactgtcgattacagaaatgccttgcc
gtggggatgtctcgagatgctgtaaaatttggccgcatgtcgaaaaagcagagagacagc
ttgtacgcagaggtacagaagcaccgaatgcagcagcagcagcgagaccaccaacagcag
cctggggaagccgagccgctgactcccacctacagcatctcggccaacgggctcacggag
cttcacgatgacctcagcaactacatcgacgggcacacccccgagggcagcaaggcagac
tctgccgtcagcagcttctacctggacatccagccttccccggaccagtcaggtcttgat
atcaatggaatcaaaccagaacccatatgtgactacacaccagcatcaggcttcttcccc
tactgctctttcaccaacggagagacttccccaactgtgtccatggccgaactagaacac
cttgcacagaatatatctaaatcacatctggaaacttgccaatacttgagagaagagctc
cagcagataacgtggcagacttttctacaggaggagattgagaattatcaaaacaagcag
cgggaggtgatgtggcaattatgtgccatcaaaattacagaagctatacagtacgtggtg
gagtttgccaaacgcattgatgggtttatggaactatgtcagaacgatcaaattgtgctt
ctcaaagcaggttctctagaggtggtatttatcagaatgtgccgtgcctttgactctcag
aacaatacagtgtacttcgatgggaaatatgctagccccgatgtcttcaaatccttaggt
tgtgaagactttattagctttgtatttgaatttggaaagagtttatgttctatgcacctg
actgaagatgaaattgcattattttctgcatttgtcctgatgtcagcagatcgctcatgg
ctgcaggaaaaggtaaaaattgaaaagctgcaacagaaaattcagctagctcttcaacat
gtcctacagaagaatcaccgagaagatggaatactaacaaagttaatatgcaaggtgtct
acattaagagccttatgtggacggcatacagaaaagctaatggcgtttaaagcaatatac
ccagacattgtgcgacttcattttcctccattatacaaggagttgttcacttcaggattt
gagccagccatgcagattgatgggtaa
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