Capra hircus (goat): 102168935
Help
Entry
102168935 CDS
T02910
Symbol
SPG7
Name
(RefSeq) paraplegin isoform X1
KO
K09552
spastic paraplegia 7 [EC:3.4.24.-]
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
chx01002
]
102168935 (SPG7)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
chx03110
]
102168935 (SPG7)
Peptidases and inhibitors [BR:
chx01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
102168935 (SPG7)
Chaperones and folding catalysts [BR:
chx03110
]
Other chaperones and cochaperones
AAA proteases
102168935 (SPG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_5
AAA_17
nSTAND3
RuvB_N
AAA_22
AAA_16
AAA_2
Mg_chelatase
TIP49
AAA_14
ORC-CDC6-like
AAA_28
IstB_IS21
PglZ
DUF8203
ABC_tran
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
102168935
NCBI-ProteinID:
XP_017917378
LinkDB
All DBs
Position
18:15864475..15885588
Genome browser
AA seq
811 aa
AA seq
DB search
MAAAWLLLRALRPGLGPGPGPGPGRLRYPYSGWNPGCSSGAKWRWPYVVHRPPMGLVGPG
GRALQSFQLRLLTPTFEGISRLLVKQHIVQNPVGLWKLLGGTYYFNTSRRKQKTKDNDKA
KGRSPEDDEEERRRREREDQMYRERLRTLFVIAVIMSLLNALGSSGGNISWNDFVHEMLA
KGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEEKLRAAEDELNIE
GKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFT
IVDGKMGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKT
LLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKK
RSTAVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVF
IDLPTLQERKEIFEQHLKSLKLTRASSFYSQRLAELTPGFSGADIANICNEAALHAAREG
HTAVHTSNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSI
TPRTNAALGFAQMLPRDQHLFTREQLFERMCMALGGRASESISFNRVTSGAQDDLRKVTR
IAYSMVKQFGMAPSIGPVSFPEAQEGVTAIGRRPFSQGLQQMMDHVSPSQPEPCVWGGGC
GVLAPRPQELRFWEARLLVATAYRHTEQVLRDNLDKLHALASALLEKEVINYEDIEALIG
PPPHGPKKRIAPQKWSDAQREKQDSGEEEGA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgtggctgctgctgcgcgctctccgcccggggctgggaccggggccggga
ccggggccggggaggctgcggtacccctactcgggctggaacccaggctgctcctccggg
gccaagtggaggtggccatatgtcgtccacaggcctccgatgggcctcgtcgggcctggt
ggccgagccctgcagagtttccagttgcgactgctaacccctacctttgaaggaatcagc
agattgttggtgaaacagcacattgtacagaatccagtcgggctctggaaacttctagga
ggcacttactattttaacacttcgaggaggaagcagaagaccaaggacaatgataaagcc
aaggggaggagccctgaggatgacgaagaggagcgcaggcgccgggagcgcgaggaccag
atgtaccgagagcggctgcgcaccctgtttgtcatcgcagtgatcatgagtctgctcaat
gcgctgggctccagcgggggcaacatctcctggaatgacttcgtgcacgagatgctggcc
aagggcgaggtgcagcgggtgcaagtggtgcccgagagcgacgtggtggaggtgtacctg
caccccggtgccgtggtgttcgggcggcctcggctggcattgatgtaccgaatgcaggtg
gcaaacatcgacaaatttgaagagaagcttcgagcagctgaggatgagctgaatattgaa
ggcaaggacaggattccagtttcctacaagcggacaggattctttggaaatgctctctac
gccctggggatgacagccgtgggcctggccatcctgtggtatgtcttccgtctggctggg
atgacaggacgggaaggcggattcagtgcctttaatcagctgaaaatggctcgtttcaca
attgtggatggcaagatgggaaaaggagtcagcttcaaagatgtggcaggaatgcatgag
gccaagctggaggtcaaggagttcgtggattatctgaagagcccggagcgcttccttcag
cttggcgccaaggtcccgaagggcgcactgctgctcggcccccctggctgcgggaagacg
ctgctggccaaagcagtggccacagaggcccaggtgcccttcctggcgatggctggccca
gagttcgtggaggtcattggaggcctcggtgccgcccgtgtgcggagcctcttcaaggaa
gcccgggcccgggccccctgcatcgtgtacatcgacgagatcgacgccgtgggcaagaag
cgttccaccgccgtgtccggtttctccaacacagaggaggagcagacgctcaaccagctg
ctggtggagatggacggaatgggtaccaccgaccacgtcatcgtcctggcggccaccaac
cgagctgacattttggacaatgctctgctgaggccgggccgactggacaggcacgttttc
atcgaccttcccactctgcaggaaaggaaggagatctttgagcagcacctgaagagcctg
aagctgacgcgggccagcagcttttactcccagcggctggcggagctgacacctggcttc
agtggcgctgacattgccaacatctgtaatgaggctgcgttgcacgcggcgcgggagggg
cacacagctgtacacacgtccaacctggactatgccgtggagcgcgtcgtggccgggact
gccaagaagagcaaagtcctttccaaggaagagcagaaggtggttgctttccacgagtcg
ggccacgccctggtgggctggctgctggagcacacggaggctgtgatgaaggtgtccatc
actcctcggaccaacgcagccctgggctttgctcagatgctcccgagagaccagcacctc
ttcaccagggagcagctatttgagcgcatgtgcatggccctgggcggccgcgcatccgag
tccatctctttcaacagggtcacttccggggcacaggacgacctgcggaaggtcacccgc
atcgcctactccatggtgaagcagtttgggatggcgcccagcattgggcccgtctccttc
cccgaggcccaggagggcgtcacggccatcggacggcgtccattcagccagggcctccag
cagatgatggaccacgttagtccctcccagcctgagccctgtgtgtggggaggagggtgt
ggtgtgctggccccgcgcccgcaggagctgaggttctgggaagcgaggctgctggtggcc
actgcctataggcatacggaacaggtgcttcgggacaacctggacaagctccacgcgctg
gcgagtgccctgctggaaaaggaagtgatcaactacgaggacatcgaggccctcatcggc
ccaccgccccacgggcccaagaaaaggattgcaccgcagaagtggagcgatgcccagaga
gagaagcaggactcgggggaggaggagggggcttag
DBGET
integrated database retrieval system
