Capra hircus (goat): 102169203
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Entry
102169203 CDS
T02910
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
chx
Capra hircus (goat)
Pathway
chx04136
Autophagy - other
chx04140
Autophagy - animal
chx04211
Longevity regulating pathway
chx05010
Alzheimer disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102169203 (ATG13)
04136 Autophagy - other
102169203 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102169203 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102169203 (ATG13)
05014 Amyotrophic lateral sclerosis
102169203 (ATG13)
05016 Huntington disease
102169203 (ATG13)
05017 Spinocerebellar ataxia
102169203 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
102169203 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102169203 (ATG13)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102169203 (ATG13)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102169203 (ATG13)
Atg1 complex
102169203 (ATG13)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102169203 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102169203
NCBI-ProteinID:
XP_017914633
LinkDB
All DBs
Position
15:complement(6359798..6407559)
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTTGEDTGV
TCPSVEDSQEVCATSFSTSPPSQCVLTATKALSQTPAPVVTDTLRVPTAGLAFSHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQLMVPGKEGGVPLGPNQPAHGAQADQER
LATYTPSDGAHCAATPSSSEDAETVSNGSEGRASPHDVLETIFVRKVGAFVNKPINQVTL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPETTSPLQGSLHSDGSSGGSSGHTQDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSLDIGAQSMAEDLDSLPEKLAAHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgatcgtccaggctcgactgggagagaagatttgtactcgt
tcgtcttcttccccgacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtagagatctcactcaagacttctgagggagattccatggagctggaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ttgtcattgctgctgaagtctctgcttgctataactagggtgacaccagcttacagactc
tccagaaagcaagggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcctgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcatccctgcaattacagaaccaccggcgaggacactggagta
acgtgtccttctgtggaagattctcaagaagtgtgcgccacctccttttccacctcgcct
ccctcccagtgtgtgcttacggccacaaaggcactttctcagacccctgctcctgtggtg
acggacactctgagggtccccacggcaggactggccttttcccaccaactctccagctct
cgcctttcctatcagcctgctgccctgggcgttggatccgctgacctggcttatccagta
gtgtttgctgctggcttaaacgccacacaccctcaccagctaatggtccccgggaaggaa
ggtggggtaccccttggtcccaaccagcctgcccatggtgcccaggctgaccaggagaga
ctggcaacctacaccccttctgatggggcccactgtgccgccacgccgtccagcagtgag
gacgctgaaactgtatcaaacggcagcgagggacgggcctccccccacgatgtcttggag
accatctttgtccggaaagtgggggcttttgtcaacaagcctatcaaccaggtgaccctg
accagtttggacataccctttgccatgtttgctcccaagaacctggagctggaggatacg
gaccccatggtgaatccgccagattccccagagactacatctcctctccagggcagcctg
cactctgatggctccagcgggggcagcagcggccatacccaggacgacttcgtcatgatc
gacttcaaaccagctttttctaaagatgacatccttccgatggacttggggaccttctat
cgtgaatttcagaacccgcctcagctgagcagcctctcccttgacatcggggcccagtcc
atggccgaggacctggactcactcccagagaagctggctgcacacgagaagaatgtccga
gaatttgatgcctttgtagaaacgctgcagtaa
DBGET
integrated database retrieval system
