Capra hircus (goat): 102169643
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Entry
102169643 CDS
T02910
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X5
KO
K06238
collagen type VI alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04151
PI3K-Akt signaling pathway
chx04510
Focal adhesion
chx04512
ECM-receptor interaction
chx04820
Cytoskeleton in muscle cells
chx04974
Protein digestion and absorption
chx05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
102169643 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102169643 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102169643 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102169643 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
102169643 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
102169643 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chx04147
]
102169643 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
102169643 (COL6A3)
Exosome [BR:
chx04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102169643 (COL6A3)
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102169643 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
102169643 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
fn3
HC2
Motif
Other DBs
NCBI-GeneID:
102169643
NCBI-ProteinID:
XP_013818488
EnsemblRapid:
ENSCHIG00000018312
LinkDB
All DBs
Position
3:3863249..3955497
Genome browser
AA seq
2469 aa
AA seq
DB search
MRKHRHLPLVAILCLFFSGFSFTHGQQQPESKRDILFLFDGSANLMGQFTAARDFLYKVI
DELDVKPDGTRIAVAQYSDDVKVESRFDQHQNKPEILNLVKRMKLKTGKTLNLGYALDYA
QRYIFVKSAGSRIEDGVLQFLVLLVAGKSSDRVDTPALNLKQSGVVPFILQAKNADPAEL
ELIVPSPAFILAAESLPKIGDLQPQIVNLLKSVQNGAPAPVSVEKDVVFLIDGSEGVRSG
FPLLKEFVQRVVESLDVGPDRVRVAVVQYSDRTRPEFYLNSYMDQQSVVGAIRGLALLGG
PAPNTGAALEFVLRNILVGSAGSRIEEGVPQLLIVLTADRSGDDVRGPSVVLRRGGAVPI
GIGIGNADITEMQTISFIPDFAVAIPTFRQLGTIQQVISERVTQLSREELSRLQASVSPV
TPPVVSGKRDVVFLIDGSQSAGPEFQYIRTLIERLVDYLDVGFDTTRVAVIQFSDDPRVE
FLLNVHSSKDEVQNAVRRLRPKGGRQVNVGGALEYVARNIFKRPLGSRIEEGVPQFLVLI
SSGKSDDEVDDSAVELKQFGVAPITIARNVDQEELVKISLSPEYVFSVNTFRELPSLEQK
LLTPITTLTAGQIQQLLASTRYPPPAVEADAADIVFLIDSSDGVKPDGIAHIRDFVIRIV
QRLNVGPNKVRIGVLQFSNDVFPEFQLKTYKSQASVLDAIRRLRFRGGSPLNTGKALEFV
ARNYFVKSAGSRIEDGVPQHLVLFLGGRSQDDISRYSQVIKSAGIASLGVGDRNIDRTEL
QTITSDPRLVFTVREFRDLPNIEERVMNSFGSSRATPAPSGVDTPSPSRPEKKKADIVFL
LDGSINFRRDSFQEVLRFVSEIVDTVYEGGDSIQVGLVQYNSDPTDEFFLKDFPTKQQII
DAINKVVYKGGRHANTKVGLEHLRLNHFVPEAGSRLDQRVPQIAFVITGGKSVEDAQEAS
MALTQRGVKVFAVGVRNIDSEEVGKIASNSATAFRVGNVQELSELSEQVLETLHDAMHET
LCPGMTDVSKACNLDVILGFDGSRDQNVFVAQKGLESKMDAILRRISQMQKISCSGSQLP
TVRVSVVALTPSGPVEAFDFAEYQSELFEKFQNMRAQHPYVLTADTLKLYQNKFQQASSD
NVKVVIHFTDGVDGDLADVQRASEELRQDGVRALILVGLERVANLEQLMQLEFGRGFTYN
RPLRLNLLDLDYELAEQLDNIAEKACCGIPCKCSGQRGDRGPIGSIGPKGIPGEDGYRGY
PGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELGEIGLDGLNGEDGDKGL
PGTSGEKGSPGRRGDKGPKGDKGERGDVGIRGDPGNSGQDSQQRGAKGETGDIGPVGLPG
RDGVSGGPGEPGKSGGFGRRGPAGAKGNQGGPGPQGPVGEQGTRGAQGPPGPTGPPGLIG
EQGIPGPRGSGGTAGAPGERGRTGPLGRKGEPGDPGPKGSIGNRGPRGETGDDGRDGVGS
EGRRGKKGERGFPGYPGPKGNPGEPGTDGPPGPKGVRGRRGNSGPPGIAGQKGDPGYPGP
SGYKGSRGDSMDQCALVQSIKDKCPCCYGPLECPVFPTELAFALDTSEGVTQDTFSRMRE
VVLKILDDLTIAESNCPRGARVAVVTYNNEVTTEIRFADSKKKSILLDKIKNLQVSLTSK
QQSLETAMSFVARNTFKRVRSGFLMRKVAVFFSNRPTRASPQLREAVLKLSDAGITPLFL
TSQEDRQLINALQINNTAVGHALVLPAGGDLTDFLKNVLTCHVCLDICNIDPSCGFGSWR
PSFRDRRAAGSDVDIDMAFILDSSESTTPFQFNEMRKYIEYLVRQLDVSPDPKASQHFAR
VAVVQHAPYEAVDNASVPPVKVEFSLTDYGSKEKLLAFLGSRMTQLQGTRALGRAIDYTI
QNIFESAPNPRDLKIVVLMLTGEVQKQQLEEAQRAILQAKCKGYFFVILGIGRKVNVKEL
YSSASEPNDVFFKLVDKSTELNEEPLMRFGRLLPSFVSSKDAFYLSPDIRKQCDWFQADQ
PAKNLVQFGYKQINVPNNVTSSPTSKLVTTTKPVITTTKPVTVVNLPASKPAAMRPAGER
PTAGRSEASKTEATKAEATKPVATKPVASKPEASKTEATKPVVTKPEATKPVASKTEVIK
TDSAKPVAAKTEATKTEAAKPVVTKAEAAKPMATRTEATKTEAAKLMATKTEATKPVAAR
PEAAKADTARPAAAAKPAAAKPAPARPPAAARSTATRSEAPRPQGARMAASRPATAKPVV
KAPREVHVSEVTENSARLHWERPEPPSPYLYNLTVTSAHDQAVVLRQNLTGTDRVIGGLV
PGQTYHVMVTCSLRSQVRAVYQGSFSTKKIQFPPPQAERSASSATINLVVSTDRLAGSKA
DICKLPKDGGTCREFVLKWYYDSITENCARFWYGGCGGNENRFNSQDECEKVCPPVPIKQ
PGVIAAMGT
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcggcatttgcccttagtggccattctttgcctctttttctcaggcttc
tcctttactcatggtcaacaacagccagagagcaagcgagacatcctgttccttttcgac
ggctcagccaacctcatgggccagttcactgctgcccgcgactttctctacaaggtcatc
gacgagctggatgtgaaacctgacgggacccggatcgcggtggctcagtacagtgacgac
gtcaaggtggagtcccgttttgaccagcaccagaataagcctgagatcctgaatctcgtg
aagaggatgaagctcaagacgggcaaaaccctcaacctgggctacgccctggactacgca
cagaggtacatctttgtgaagtctgctggaagccggatcgaggacggagtgcttcagttc
ctggtgctgctggtggcgggaaagtcatcggaccgggtggatacgcctgcactcaacctg
aagcagagcggggtggtgcccttcatcctccaggcgaagaacgcggaccctgctgagttg
gagctaatcgtaccatccccagcctttattctggctgcggagtctcttcctaagattgga
gacctgcagccacagatcgtgaacctcttaaaatcagtgcaaaatggggcaccagctcca
gtttcagttgaaaaggatgtggtgttcctgattgacggctccgagggggtcaggagcggc
ttcccgctgctgaaggagttcgtccagagagtggtggagagcctggacgtgggaccagac
cgggtgcgtgtggccgtggtgcagtacagcgaccggaccaggcccgagttctacctgaat
tcctacatggaccagcagagcgtggtgggagccatccgcgggctggccctgctggggggg
ccagcccccaacacgggggctgccctggagttcgtcctgaggaacatcctggtgggctcc
gccggaagccgcatagaggaaggcgtcccccagctcttgattgtcctcacggccgacagg
tctggggatgacgtgagaggcccctctgtggtcctgaggaggggaggggccgtgcccatt
ggcattggcattggaaatgctgacatcactgagatgcagaccatctccttcatcccggac
tttgccgtggccatccccaccttccggcagctggggaccatccaacaggtcatctcggag
agagtgacccagctcagccgcgaggagctgagcaggctgcaggcgtctgtcagccccgtg
acccctccggtggtcagcggcaagagggacgtggtttttctcatcgatgggtcccagagt
gctggccccgagttccagtacatccgaacgctcatcgagaggctggtcgactacctggat
gtgggcttcgacacgacccgggtggcggtcatccagttcagcgatgaccccagggtggag
ttcctgctgaacgtccactccagcaaggacgaggtgcagaacgcggtgcggcggctgcgg
cccaaaggcgggaggcaggtcaacgtcgggggtgccctggagtacgtggcaaggaacatc
ttcaagaggcccctggggagccggattgaggagggtgtccctcagttcctggtcctcatt
tcctccgggaagtcggatgacgaggtggacgactcggccgtagagctcaagcagtttggt
gtggcgccaatcacgatcgcccggaacgtggaccaggaagagctggtgaagatctcgctg
agccccgagtacgtgttctcagtgaacaccttccgagagctccccagcctggagcagaaa
ctgctgacacccatcaccaccctgactgctggacagatacagcagctcctggccagcaca
cgctacccacctccagctgtggaggccgatgctgcggacattgtcttcctcatcgacagc
tctgatggcgtgaagccggatggcatcgcacacatccgggactttgttatcaggatcgtg
cagagactcaacgttggtcccaacaaagtgagaattggggtcctgcagttcagcaacgat
gtcttcccagaatttcaactaaagacctacaaatcccaggccagcgtgctggacgccata
cgtcgcctgaggttcagaggggggtctcctctcaacactggcaaagctctggaattcgtg
gcaaggaattactttgtcaagtctgccgggagccggatagaagatggggtgccccaacac
ctggttctatttctgggtggaaggtcccaggatgatatttccaggtattcccaggtgata
aaatctgcgggaattgcgagcttaggagttggagaccgaaacattgacagaacagagctg
cagaccatcaccagcgaccccaggctggtcttcacggtgcgggagttcagagacctcccc
aacatagaagaaagggtcatgaattcctttgggtcctccagggccacccctgcaccttcg
ggagtggacacaccctctccctcaaggccagagaagaagaaagctgatattgtgttcctg
ctggatggttccatcaatttccggagagacagtttccaggaagtgctccgttttgtgtca
gaaattgtggacacagtttatgaagggggcgactccatccaggtggggctagtccagtac
aactctgaccccaccgacgagttcttcctgaaggacttccccaccaagcagcagattatc
gacgccataaacaaggtggtctacaaaggggggagacacgcaaacaccaaggtgggcctg
gagcacttgcggctgaaccacttcgtgcccgaggcaggcagccgcctggaccagagggtc
ccgcagatcgcctttgtgatcacggggggcaagtcggtggaggacgctcaggaggcgagc
atggcgctcacacagagaggcgtcaaggttttcgcagtgggtgtaaggaacatcgactcg
gaggaggttgggaagatagcgtccaacagcgccacggccttccgggtggggaacgtccag
gagctgtcagaactgagtgaacaggttttggaaactctgcacgatgcgatgcatgagacc
ttatgtccaggcatgactgatgtttccaaagcctgtaacttggatgtgattctgggcttc
gatggttcaagagatcagaatgtctttgtggctcagaagggcctcgagtccaagatggac
gccatcctgaggagaatcagtcagatgcagaaaatcagctgcagcggcagccagctgccc
acggtgcgggtgtccgtggtggccctcacgccctcgggtcctgttgaggccttcgacttt
gctgagtaccagtcggagctgtttgagaagttccagaacatgcgtgcccagcacccctac
gtcctcaccgcggatacactgaagctctaccagaacaagttccagcaggcctcgtcggac
aacgtgaaggtggtcattcattttacggatggagtggatggggatctggctgatgtacaa
agagcatcagaggaactccgacaagacggtgtccgagctctgatcttggtgggcctcgaa
cgcgtcgccaacttggagcagctcatgcagctggagttcgggcgaggattcacgtacaac
cggcccctgaggctgaacttgctggacctagactacgaactagccgagcagcttgacaac
atcgctgagaaagcctgctgtgggattccctgcaaatgctctggacaaagaggagaccga
gggcccataggcagcatcgggccaaagggcattcctggagaagatggctaccgaggttat
cctggtgatgaaggtggacctggtgagcgcggtcctcctggcgtgaacggcactcaaggt
ttccagggctgccccgggcagagaggagtcaagggctcgcgtggattcccaggagagaag
ggtgaattaggagaaattggactggacggtcttaatggtgaagatggcgacaaagggctg
cccggcacttctggagagaaagggagtccaggaaggaggggtgacaaaggacccaaaggt
gacaaaggggagagaggtgatgtcgggatcagaggcgacccgggcaattcaggacaggac
agccagcagagaggagccaaaggagaaaccggagacatcggccccgtgggtctccctggg
agagacggggtgtctggagggcctggagaacctgggaagagcggtggctttggccgaagg
ggaccagcaggagctaagggcaaccagggcggccccggcccgcagggccccgtgggagag
caggggaccagaggcgcgcagggtccgcctggtcccaccggtcctccaggcctgattggt
gaacagggcattcctggacctaggggaagcgggggaaccgcaggtgctcctggagaacgc
ggcagaactgggcccctgggaagaaagggtgagcccggagatccaggacctaaggggagc
atcgggaaccggggtcctcgtggggagacgggagatgatgggcgagatggagttggcagt
gaaggacgcaggggcaagaaaggagaaagaggattccctggatacccaggtccaaagggt
aatcctggtgagccagggacagacggaccaccgggacccaaaggcgtcagaggccgaagg
ggaaactcgggacctccagggatagctggacagaagggagaccctggttacccagggcca
tctggttacaaaggcagcagaggcgactcgatggaccaatgtgcgctggtccagagcatc
aaagataaatgcccttgctgttacgggcccctggagtgccccgtcttcccaacggagctg
gctttcgccttggacacctccgagggggtcacccaggacacgttcagccggatgagggag
gtggtcctcaagattctggacgacctgaccatcgccgagagcaactgcccacggggggcc
cgcgtggctgtggtcacctacaacaacgaggtcaccacggagatccgctttgctgactcc
aagaagaagtccatcctcctggacaagatcaagaacctccaggtgtcgctgacctccaag
cagcagagcctggaaactgccatgtcctttgtggccagaaacacgtttaagcgggtgcgg
agcgggttcctgatgaggaaggtggcggtgttcttcagcaataggcccacgagggcgtcc
ccccagctccgggaggctgtgctcaagctctcagatgccgggataacacccttgttcctc
acgagccaggaggatcggcagctgatcaacgccctacagatcaataacacagcagtggga
catgcccttgttcttcctgctggcggagacctcacggacttcttgaagaatgtcctgact
tgtcacgtctgcttggacatctgcaacatcgacccatcctgtggattcggcagctggagg
ccttccttcagggaccggagggcagcaggcagtgacgtggacatcgacatggctttcatc
ttagatagctccgagtccaccaccccgtttcagttcaacgagatgaggaagtacattgag
tacctcgtccgacagctggacgtgagcccggaccccaaggcctcccagcacttcgcccgt
gtggctgtggtgcagcacgcaccctacgaggcagtggacaacgccagcgtgccgcccgtg
aaggtggagttctccctgactgactatggctccaaggagaagctgctggccttccttggc
agcaggatgacccagctgcaggggaccagggccttgggccgcgccatcgactacaccatc
cagaacatctttgaaagtgcgcccaacccccgggacctgaagatcgtggtgctgatgctg
acgggcgaggtgcagaagcagcagctggaggaggcccagagagccatcctgcaggccaag
tgcaaaggctacttcttcgtgatcctgggcattggcaggaaggtgaatgtcaaggagctg
tacagctctgccagcgagcccaacgacgtcttcttcaagctggtggacaagtcgacggag
ctcaacgaggagcccctaatgcgcttcgggaggctgctgccgtcgttcgtcagcagtaaa
gatgctttctacctgtccccagatatcaggaaacagtgtgattggttccaagcagaccaa
ccggcaaagaatcttgtgcagtttggttacaaacaaataaatgttccgaataacgtcact
tcaagtcctacatccaaactggtgaccacaacaaagccagtgatcaccaccaccaaacca
gtaacagtggtgaacctgccagcctcaaagccagctgccatgagacctgcgggtgagaga
cccacggctgggagatctgaggcctccaagactgaggccaccaaggctgaggccaccaaa
cctgtggccaccaaacctgtggccagcaagcccgaggcctccaagactgaagccaccaaa
cctgtggtcaccaagcctgaggccaccaaacctgtggccagcaagacagaggtcatcaag
actgacagtgccaagcctgtagccgccaagactgaggccaccaagactgaagctgccaaa
cctgtggtcaccaaggctgaggctgcaaaacccatggccaccaggactgaagccaccaag
accgaggctgcaaagctcatggccaccaagactgaggccaccaaacctgtggctgccagg
cccgaggctgcaaaggcagacacagccagacctgcagcggccgcgaagcctgcagcagcc
aaacctgcccctgccagaccccccgctgctgccagatccacggccacgaggtccgaggcc
cccaggccccagggagccagaatggctgccagcaggcccgccactgctaagcctgtggtg
aaggcacctcgcgaggtccacgtgtccgaggtcacagagaacagtgccaggctgcactgg
gagaggcccgagccgcccagcccttacttgtacaacctcaccgtcacctcggcccacgat
caggctgtggtcctgaggcagaacctcactggcacggaccgcgtcatcgggggcctggtc
cccgggcagacttaccacgtcatggtgacctgctccctgaggtctcaggtcagagccgtc
taccaaggcagcttcagcacgaagaaaattcagtttccacctccgcaagcagagcggtca
gcttctagtgcaaccatcaacctagtggtgagcacagaccggttggctgggagtaaagca
gatatatgtaagttgccaaaggacggcggaacttgcagagagtttgtattaaagtggtac
tatgattccataactgaaaactgcgccagattctggtatggaggctgcggtggaaacgaa
aacagatttaattcgcaggatgaatgtgaaaaggtttgccctcctgtgcccatcaagcag
cccggggttatcgccgcgatggggacctag
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integrated database retrieval system
