Capra hircus (goat): 102169649
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Entry
102169649 CDS
T02910
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
chx
Capra hircus (goat)
Pathway
chx04136
Autophagy - other
chx04140
Autophagy - animal
chx05010
Alzheimer disease
chx05014
Amyotrophic lateral sclerosis
chx05016
Huntington disease
chx05017
Spinocerebellar ataxia
chx05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102169649 (ATG2A)
04136 Autophagy - other
102169649 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102169649 (ATG2A)
05014 Amyotrophic lateral sclerosis
102169649 (ATG2A)
05016 Huntington disease
102169649 (ATG2A)
05017 Spinocerebellar ataxia
102169649 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
102169649 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chx04131
]
102169649 (ATG2A)
03029 Mitochondrial biogenesis [BR:
chx03029
]
102169649 (ATG2A)
Membrane trafficking [BR:
chx04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
102169649 (ATG2A)
Mitochondrial biogenesis [BR:
chx03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102169649 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
102169649
NCBI-ProteinID:
XP_017898817
UniProt:
A0A452EY85
LinkDB
All DBs
Position
29:complement(43541761..43562936)
Genome browser
AA seq
1927 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLEIWSVN
EVLESMESPLELVEGFVGSIEVAVPWAALLTDHCTVHVSGLQLTLQPRQGPGPGTADSQS
WASCMTTSMQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
SLGTGERGVAVEAHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLAGVRLHFEELP
QQEGPPQPPLQIGSCSGCLELTVKLKQNEAFPGPKLEVCGQLGSLHLLLTPRQLQQLQEL
LGAVSLADPESLVDKLNKSRPLGAEDLWLIEQDLNQQLQAGTGTEPLSPDPLSNPLVNLE
GTDLFFSMAGLTSSVASAVSELSLSDVDLGSSVHSTTASRRLSAQAPPTGRTAPVPPSNT
LRPDSLLKMTLAGVTLTLLQTSAPSSGPPDLTTQFFAEFDASVDGSFGSHDLHRLRPRFQ
RACPCSHVRLTGAAVQLSWGLQTSRGRRVTSTEMHFGQLEVLECLWPGGALEPECAEILS
FPNSLRPQASAQPCAHLRHTQTLRRVPKSRPRRPPACRCHSELALDLADFQADVELGALD
RLAALLLQATTPPPELPAGLLTEPPLAAEQHTLVRLSAPRATLQLRFPIADLRPERDPWA
GRAVRAEQLRLELTEPQFRSELSSGPGPPAPTRLELTCSDLHVTYEDGEKPPVPCLRVSK
ALDPKSPGHKYFLPQVVVTLNPQLSAQWEVAPEKGEDLELSAENLCDLREPEPSPFSSKR
TMYETEEMVIPGDPEEMRTFQNRALALSRCSLEVVLPAAHVFLPSKEVYESLYNRINNDL
LMWEPADLLPAPAPAPAAGCPGASGLWHDSFKMCKSALRLDSDSDDEDTHFSVGASGAPQ
PLARESRSPRSQSTFSALVTVLKGRITAHCETKDECGKRLEGAHGELVLDVEQGTIFSVS
QYRGQPGLGYFCLEAEKAALYHRAAMDDYPLPSRLELPAFAPPAQLARTIYPSEDGVTEE
GASGRRGQGRGPHMLSTAVRIQLDPHRNVKEFLVTLRLHRATLRHRMALPEQSWHSQLLE
FLDVLDDPVLGYLPPTVITILHVHLFSCAVDYRPLYLPVRVLVTAETFTLSSNIVMDTAT
FLLRFILDDSALYLSDKCEMETLDLRRDYVCVVDVDLLELVIKTWKGNSEDRLSQPLFEL
RCSNNAMHVHSCADSCALLINLLQYLTSAGDLHPPPRPPSPTEIAGQKVQLSESPASLPS
CPPVETALINQRDLTDALLDTERSLRELAQASGSPFFQASPVSVYLFPGERSGAQPPSPA
AGAPTGSLGSRSRAKEAEKEEEGDVDTLDSDEFCILDAPGLGILPADGEPVVTQLHPGPI
VVQDGHFAQPLGSTDLLRAPAHFPVPSSRVVLREISLVWHLYGGRDFGPHPGHRARVSLS
GPRSSPSRSSGPNRPQNSWRAQGGSGRQHHVLMEIQLSKVSFQHEAYPAEPGPVVPGREL
EEQPLSRQVFIVQELEVRDRLASSQINKFLYLHTSERMPRRTHSNMLKVKALHVAPATNL
GGPECCLRVSLLPLRLNVDQDALLFLRDFFTTLAASINPVVPAENSAEARPETPVPPSGP
QEGQPEGVETTSSQEAAGGRHGVPPTEQQPIYFREFRFTSEVPIWLDYHGKHVTMDQVGT
FAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGVGPM
HSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAIQAT
AETVYDILSPAAPVSRSLQDKRSVRRLRKGQQPADLREGVAKAYDTVREGILDTAQTICE
VASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQILPDAHKDHALKW
RLDEARD
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccgtggtcgaactgtgtgaaagagcgggtttgccgctacctg
cttcaccactacttgggtcacttcttccaggagcacctcagcctggaccagctcagcctg
gatctgtacaagggcagcgttgccctgcgggatatacatctggagatctggtccgtgaat
gaggtactggagtctatggagtcgccactggagctggtggaaggcttcgtgggctccatt
gaagtggccgtgccctgggctgccctgcttaccgaccactgcactgtgcacgtgtcaggc
ctccagctcaccttacaaccccgccagggcccagggccggggaccgccgactcacagagc
tgggcctcgtgcatgaccacgagcatgcagctggctcaggaatgcctgcgggacgggctg
cctgagccctctgagccaccgcagcccctggaaggactggagatgttcgcccaaaccatc
gagactgtactgcgaaggatcaaggtgaccttcttagatactgttgtgagggtggagcac
tcgctgggcactggggagcgtggcgtggcagtggaggcccatgtgcagagactggagtac
tgcgatgaggcggtgcgagacccaagccaggcgcccccggtggatgtgcaccagcctcct
gccttccttcacaagctgctgcagctggcgggggtccgcctgcacttcgaggagctcccc
cagcaggaaggacccccacagccgcccttgcagatcggcagctgctcagggtgcctggag
ctgacagtgaaactgaagcagaatgaggcgttcccaggccccaagctggaggtgtgtgga
cagctgggctccctgcacctgctcctgaccccacggcagctccagcagcttcaggaactg
ctcggtgctgtgagccttgcagaccctgagagcctggtggacaagctgaacaagagccgc
ccgcttggcgctgaagacctgtggctgattgaacaagatctgaaccagcagctgcaggcg
gggactgggactgagcccctcagcccagaccccctctcgaacccccttgtcaacctagag
ggcactgacctcttcttctccatggcgggcctcacaagcagtgtggcctcagctgtgtcc
gagctctcgctctccgacgtagacctgggctcctctgtgcacagtaccacagcctcccgc
cggctctctgcccaagcccccccaactggcaggacagccccagtgcccccctcaaacacc
ctgcgccccgactcgctgctgaagatgaccttggcgggtgtgaccctgaccttgcttcag
acgtctgccccgtcttctggaccacctgacctcaccacccagttttttgccgaattcgat
gcctccgtggatgggtccttcggctcccatgacttgcaccgtctccgaccgcgcttccag
agggcctgtccttgcagccatgtccggctaacgggtgctgccgtgcagctgtcctggggg
ctgcagacgagcaggggccggcgggtcaccagcacagaaatgcacttcgggcagctggag
gtgctggagtgcctgtggcccgggggcgccttggagcctgagtgcgcagagatcctgagc
ttccccaacagcctgcgaccccaggcctcggctcagccctgcgctcacctgcgccacacg
cagaccctgcgccgggtgcccaagagccggccccggcgcccacctgcctgccgttgtcac
tcagaactggccctggacctggccgacttccaggcggatgtggaactgggggccctggac
cggctcgctgccctgctgctccaggccaccacgccccctcctgagctgcctgcgggcctg
ctgacagagcccccgctggcagctgagcagcacacgctggtgcggctctcagcaccccgg
gccacactgcagctgcgcttccctatcgctgacctgcggcctgagcgggacccctgggcg
gggcgggccgtgcgggcggagcagctgagactggagctgactgagccccagttccggtca
gagttgagcagtgggcctggtcccccagcccccacccgcctggaacttacctgctctgac
ctgcatgtcacctatgaagatggagagaagccgcccgtcccctgcctgcgggtctccaaa
gctctggatcccaagagccctgggcacaagtacttcctgccccaggtagtggtgaccctc
aacccccagctcagtgcacagtgggaagtggccccggagaagggagaggatctggagctg
tcggctgagaacctgtgcgaccttagggagcctgagccctcgcccttctcctccaagagg
accatgtacgagacggaagagatggtgatccctggagaccctgaggagatgaggaccttt
cagaaccgggccctggcactgtcccgctgtagcctggaagtggtcctgcccgccgcccat
gtcttcctgcccagcaaggaggtctacgagagcctctacaacaggatcaacaacgacctg
ctcatgtgggagcccgcagacctgctccccgcccccgcccctgctcccgccgccggctgc
ccaggtgcctcgggcctctggcacgacagcttcaagatgtgcaagtctgccctcaggctg
gactcggactcggacgacgaggacacccacttctcagtgggggcatcaggtgccccccag
ccccttgcccgtgagtcccggagccctcgctcccagagcaccttctctgcactggtgacg
gtgctgaagggccggatcaccgcccactgtgagaccaaggacgagtgtgggaagcggctg
gagggcgcccatggggagctggtgctggacgtggaacaaggaaccatcttcagtgtctct
cagtacagaggccagccggggcttggctacttctgcctagaagcggagaaggcagcgctc
taccaccgagcggccatggatgactacccactgcccagtcgcctggagctgcccgccttt
gctcccccggcccagctggcccggaccatctacccatcagaggacggggtgactgaggaa
ggagcctcgggccgcagaggccagggccggggcccccacatgctgtcgaccgcggtgcgc
atccagctggacccccacaggaacgtcaaggagttcctggtgaccctgcggctgcacagg
gccaccctgcgccaccgcatggccctgccggagcagagctggcactcccagctattggag
ttcttagatgtcctggatgacccagtgctgggctacctgcctccaacggtcatcaccatc
ctacacgtccacctgttctcctgtgccgtggactacaggcccctctacctccccgtacgt
gtccttgtcactgctgagaccttcaccctctccagcaacatcgtcatggacaccgctacc
ttcctgctcaggttcatcctcgacgactccgccttgtacctgtccgacaagtgtgagatg
gagaccctggatctgcggcgagattatgtctgcgtcgtggacgttgacctcctggaactt
gtgatcaaaacctggaaggggaactctgaggacagactgagccagccgctgttcgagctg
cgctgctccaacaatgcgatgcacgtgcacagctgcgctgactcctgcgccctgctgatc
aacctgctgcagtacctgacgagcgcgggggacctgcaccccccaccccggccgcccagc
cccacggagatcgctggccagaaggtgcagctctcagagagccccgcctccctgccctcg
tgcccgccggtggagacggccctcatcaaccagcgggacctgacggacgccctcctggac
actgagcgcagcctgcgggagctggcgcaggcctcaggcagccccttcttccaggcctct
ccagtgtcagtctacctgttccccggagaacggagtggggcccaacccccctcgcccgct
gctggggcccccactggcagcttggggtcccgctccagggccaaagaagctgaaaaggaa
gaggagggggatgtagacactctggacagcgatgagttctgcatcctggacgctcctggc
ctgggcatcctgcctgccgacggggagcccgtggtgacgcagctgcacccaggccccatt
gtagtgcaggacgggcactttgcacagccgctgggcagcacggacctgctgcgggcacct
gcccacttccccgtgcccagcagtcgagtggtgctgcgtgagatctccctcgtctggcac
ctctatggcggccgagactttggcccccaccctggccacagggcaagggtcagcctctca
ggcccccggagttccccttctcgtagctccggccccaaccggccacagaactcctggcgt
gcgcaggggggcagtgggaggcagcaccacgtccttatggagatccagcttagcaaggtg
agcttccagcacgaggcgtacccggcagagccaggcccggtcgtccccggcagggagctg
gaggagcagccgctgtcccgccaggtgttcatcgtgcaggagctggaggtgcgcgaccgg
ctggcctcctcccagatcaacaagttcctgtatctccacacgagcgagcgcatgccacgg
cgcacccactccaacatgctcaaggtcaaagcgctgcacgtggcccccgcgaccaacctg
gggggccccgagtgctgcctccgcgtctcgctgctgcccctgcggctcaacgtggatcag
gacgccctgctcttcctcagggacttcttcaccaccttggcggccagcatcaaccccgtg
gtcccagcagagaactctgccgaagctcgccctgagaccccggtcccacccagcggcccc
caggaagggcagcccgagggtgtggagaccaccagctcccaggaggccgcaggtggtagg
catggcgtcccccccaccgagcagcagcccatctacttcagggagttccgcttcacgtct
gaggtgcccatttggctggattaccatggcaagcacgtcaccatggaccaggtgggcact
ttcgcaggtctcctcatcggtctggcccagctcaactgctccgagctgaagctaaagcgg
ctctgctgccggcatgggctcctgggtgtagacaaggtgctgggctacgcgctcaacgag
tggctgcaggacatccgcaagaaccagctgcctgggctgctggggggcgtgggccccatg
cactcggtcgtccagctcttccaggggttccgggacctgctgtggctgcccatcgagcag
tacaggaaggacggccgcctcatgcggggactgcagcgcggtgccgcctcctttggctcg
tccacagcctcggccgccttggaactcagcaaccggctggtgcaagctatccaggccaca
gctgagacggtgtatgacatcctatccccagcggcgcccgtctcgcgctccctgcaggac
aagcgctccgtgcggaggctgcggaagggccagcagcccgccgacctccgggagggcgtg
gccaaggcctacgacacggttcgagagggcatcctggacacagctcagaccatctgtgag
gtggcgtctcggggccacgaacagaaggggctgaccggcgccgtggggggcgtcatccgc
cagctgcccccgaccgtggtgaagcccctcatcctggccactgaggccacgtccagcctg
ctgggagggatgcgcaaccagatcctccccgacgcgcacaaggaccatgctctgaagtgg
cgtctggacgaggcccgggactga
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integrated database retrieval system
