KEGG   Capra hircus (goat): 102169891
Entry
102169891         CDS       T02910                                 
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
chx  Capra hircus (goat)
Pathway
chx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102169891 (PATL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chx03019]
    102169891 (PATL1)
Messenger RNA biogenesis [BR:chx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102169891 (PATL1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102169891 (PATL1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 102169891
NCBI-ProteinID: XP_017914507
UniProt: A0A452G530
LinkDB
Position
15
AA seq 771 aa
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKP
PAAVKEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLEPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQVLCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNVRSQTPVFRPDTTHLHP
QHRRLLHQRQQQNRNQHRTLNGAGDRGSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVHGDGPRKERTKLITPQVARLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQESPSDDHFVQIMCIRKGKRMVAR
VLPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPCSLLLYHLPPVTVASLLQQL
MNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLLVLSRGEDLQSSDAASESTQSNPWTEVMF
VATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq 2316 nt   +upstreamnt  +downstreamnt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaggacgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagctcatgagcgcctggctgaactggaagagaagcca
cctgcagcagttaaggaacaaaccggcaatggagaacgggatgagatggacttgttgggt
gaccatgaggagaatctggcagagaggctcagtaagatggtgattgaaaatgaacttgaa
gacccagctatcatgagggcggtacagaccaggccagtgttggaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccccag
ggcccagaagacgatcgggacctttccgagcgcgcattaccaaggcggtccacctcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtgcccagcttcaaccagcaggtcctgtgtccaaagcctgtgcacgttcggcccccgatg
ccgccgcggtatcctgctccctatggggagaggatgtctccaaaccagctctgcagtgtc
ccgaactcctccctgctgggccacccttttccccctagcgtccctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcgcagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggattcgtgggcagcccacttgccgccatgaatcccaagctg
ttgcaagggcgagttgggcagatgctcccccctgcgccaggcttccgcgccttcttcagt
gccccaccccctgctacaccaccacctccacagcagcacccccctgggccaggaccccac
ctgcagaatgtaagatcgcagaccccagtgtttagaccagacacaacccatcttcatcca
cagcaccgtcgactcttgcatcagaggcagcaacagaatagaaatcagcatcggactctc
aacggtgcaggagacagagggagtcaccggagcagtcatcaggatcatatccggaaggac
ccgtatgccaacctcatgcttcagcgagagaaagactgggtctctaagattcagatgatg
cagctgcagagcactgacccctacctggacgacttctactaccagaattactttgaaaaa
ctggagaagctgtcagctgctgaagaagtgcacggtgacggcccaagaaaggagcgcacc
aagctcatcacgccccaggtggccaggctggagcacacctacaagccagtgcagtttgag
ggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacgtctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttttcataattgagaaaacctacagtttactgcttgatgtggaggattac
gaaaggcgttacctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgttgcatgtacgacaacttaagggggaaattgcctggacaggagagcccg
agtgacgaccactttgtgcagatcatgtgcatccgaaaggggaagaggatggtggcccgg
gtcctgcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctgcctttcctcatcaagaaggatgcgcaggatgaggtgctgccgtgcctgttgagtccc
tgctctctcctcctctaccatcttccaccagtgaccgtcgccagccttctgcagcagctg
atgaacctacctcagagtgcagcggccccagctccgtccaacccgcacctctctgccgtg
ctccagaacaagtttggcctgtccctgctcctcctcgtcctgagccgcggggaagaccta
cagagctcagacgccgcttcagaatcgacgcaaagcaacccgtggacggaggtgatgttc
gtggcaacccgagaacttttgcggattccccagacgggcctggccaagccaatctctata
cccacaaacctagtatccctcttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacggtaa

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