Capra hircus (goat): 102169891
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Entry
102169891 CDS
T02910
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102169891 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102169891 (PATL1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102169891 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102169891 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102169891
NCBI-ProteinID:
XP_017914507
UniProt:
A0A452G530
LinkDB
All DBs
Position
15
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AA seq
771 aa
AA seq
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MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKP
PAAVKEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLEPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
VIGSPPVRAVPIGTPPKQMAVPSFNQQVLCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQMLPPAPGFRAFFSAPPPATPPPPQQHPPGPGPHLQNVRSQTPVFRPDTTHLHP
QHRRLLHQRQQQNRNQHRTLNGAGDRGSHRSSHQDHIRKDPYANLMLQREKDWVSKIQMM
QLQSTDPYLDDFYYQNYFEKLEKLSAAEEVHGDGPRKERTKLITPQVARLEHTYKPVQFE
GSLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLFIIEKTYSLLLDVEDY
ERRYLLSLEEERPALMDERKHKICCMYDNLRGKLPGQESPSDDHFVQIMCIRKGKRMVAR
VLPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPCSLLLYHLPPVTVASLLQQL
MNLPQSAAAPAPSNPHLSAVLQNKFGLSLLLLVLSRGEDLQSSDAASESTQSNPWTEVMF
VATRELLRIPQTGLAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggcctgggagaggaggacgaagagattgatcaattcaatgatgatacatttgggtcaggt
gcagttgatgatgattggcaggaagctcatgagcgcctggctgaactggaagagaagcca
cctgcagcagttaaggaacaaaccggcaatggagaacgggatgagatggacttgttgggt
gaccatgaggagaatctggcagagaggctcagtaagatggtgattgaaaatgaacttgaa
gacccagctatcatgagggcggtacagaccaggccagtgttggaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtgttagaatatgccttgcctcagaggcccccccag
ggcccagaagacgatcgggacctttccgagcgcgcattaccaaggcggtccacctcgcct
gtcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagatggct
gtgcccagcttcaaccagcaggtcctgtgtccaaagcctgtgcacgttcggcccccgatg
ccgccgcggtatcctgctccctatggggagaggatgtctccaaaccagctctgcagtgtc
ccgaactcctccctgctgggccacccttttccccctagcgtccctcctgtcctcagcccc
ctccagagagcacagcttcttggaggagcgcagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggattcgtgggcagcccacttgccgccatgaatcccaagctg
ttgcaagggcgagttgggcagatgctcccccctgcgccaggcttccgcgccttcttcagt
gccccaccccctgctacaccaccacctccacagcagcacccccctgggccaggaccccac
ctgcagaatgtaagatcgcagaccccagtgtttagaccagacacaacccatcttcatcca
cagcaccgtcgactcttgcatcagaggcagcaacagaatagaaatcagcatcggactctc
aacggtgcaggagacagagggagtcaccggagcagtcatcaggatcatatccggaaggac
ccgtatgccaacctcatgcttcagcgagagaaagactgggtctctaagattcagatgatg
cagctgcagagcactgacccctacctggacgacttctactaccagaattactttgaaaaa
ctggagaagctgtcagctgctgaagaagtgcacggtgacggcccaagaaaggagcgcacc
aagctcatcacgccccaggtggccaggctggagcacacctacaagccagtgcagtttgag
ggctctttgggaaagctcactgtctctagtgtgaataatccccgaaaaatgattgatgct
gttgtgacgtctcggagtgaggatgatgagacaaaagaaaaacaggttcgggacaaaaga
cgaaaaacccttttcataattgagaaaacctacagtttactgcttgatgtggaggattac
gaaaggcgttacctcctaagtctggaagaagagcgacctgccctgatggatgaaagaaag
cacaaaatttgttgcatgtacgacaacttaagggggaaattgcctggacaggagagcccg
agtgacgaccactttgtgcagatcatgtgcatccgaaaggggaagaggatggtggcccgg
gtcctgcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaac
ctgcctttcctcatcaagaaggatgcgcaggatgaggtgctgccgtgcctgttgagtccc
tgctctctcctcctctaccatcttccaccagtgaccgtcgccagccttctgcagcagctg
atgaacctacctcagagtgcagcggccccagctccgtccaacccgcacctctctgccgtg
ctccagaacaagtttggcctgtccctgctcctcctcgtcctgagccgcggggaagaccta
cagagctcagacgccgcttcagaatcgacgcaaagcaacccgtggacggaggtgatgttc
gtggcaacccgagaacttttgcggattccccagacgggcctggccaagccaatctctata
cccacaaacctagtatccctcttttctcgttacgttgaccgacagaaactgaacttgctg
gagacaaaactgcagctagttcaggggatacggtaa
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