Capra hircus (goat): 102169904
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Entry
102169904 CDS
T02910
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102169904 (SCAF4)
03041 Spliceosome [BR:
chx03041
]
102169904 (SCAF4)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102169904 (SCAF4)
Spliceosome [BR:
chx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102169904 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102169904
NCBI-ProteinID:
XP_017903713
UniProt:
A0A452DWW9
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All DBs
Position
1:2236893..2295809
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AA seq
1144 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVTENVTNNEGSPPPPVKVSSEPPQATTNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPTQP
SEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAVAASATTTPAPAAVVPTTP
AAAAAAATAPSVAAPTASPPQAPFGFPGDGMPQPTYAQHQNMDQFPPRMMAVPQDPVHHQ
VPLPPNGQMPGFGLLPTPPFPPMAQPVIPPTPPVQQPFQTSFQAQNEPLTQKAHQEMEVE
QPCVQEAKRHISDHRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSR
SQERRDREKERERRQKGLPQIKAETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESI
NMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVEL
GVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSP
IPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPP
PPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTK
DLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPG
PVIGLQAPSTGLLGARPGMIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGF
GMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQPPPQQQQQQPPAQPPP
QQPPPAQQPPPAQQQPQPFRNDSRQQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDDR
ENSNRERREWGRRSPDRDRHRDLEDRNRRSSGHRDRERDSRDRESRREKEENRGKEKPEV
TDRAGSNKTVEPPISQAGSVDTVSELPKGEPGPAVAKPSEELPAEATSSVNPEKDPGSAA
EAPR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaagagctcttttcacttatggatatgaaacctccc
atctctcgagccaaaatgattctcatcacgaaagctgctattaaagctataaagctttat
aagcatgtggttcaaatagtagaaaagttcataaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaatcgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataactgccacattccaatatctgtat
ctttgtccatctgaagataagagtaaaatagttcgtgtattaaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgctccagtaacagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaacccccacaagccactacaaactctgtaccaactgtaccacagttgccc
agctctgatgcttttgctgctgtggcccaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccacagtctcccgccattgacaat
gccgtgatggctcaggttcaggctatcacagctcagttaaagacagctcctacacaacca
tctgaacaaaaagctgctttccccccacctgaacaaaaaactgcatttgacaagaagcta
cttgatagatttgattatgatgatgagccagaagctgtggaagaatccaagaaagaagat
gctgttgccgcctcggccaccacaacacctgctcctgccgctgttgtgcccactacacct
gccgccgccgccgccgctgccaccgcaccttctgtggctgcgcccactgcctctcctcca
caggcaccctttgggtttcctggcgatggcatgccacaaccaacatatgcccaacatcag
aacatggaccagtttccgcctcgaatgatggcagtgccgcaggatccagtgcaccatcag
gttccacttcctcctaatggacagatgccaggctttggccttcttcctacacctccgttt
cctcccatggctcagcctgtgattcctccaactccacctgtgcagcagcccttccaaact
tcctttcaggcacaaaatgagccacttacacagaaggcacatcaggaaatggaagtagaa
caaccttgtgttcaagaggctaagcggcacatatctgatcacagaaagtcaagatctaga
tcagcatccaggtcaccaaaaaggagacgatctcgatctggttctagatctcgaaggtct
cggcatcgacgttctcgatctcggtccagagatagacgccgacattctcctcggtctcga
tcccaagaaagacgagatcgagagaaggaaagagagcgtcgacaaaaaggccttcctcag
atcaaagcagaaaccgccagtgtttgtagtactacactctgggtgggacagctggacaaa
aggactactcagcaggatgttgccagtcttttagaagagtttggtccaattgaatcaatt
aatatgattcctcccagaggttgtgcctatattgttatggttcataggcaagatgcttat
cgtgccctgcaaaaactgagccgagggaactacaaagtgaaccagaaatccataaagatt
gcctgggccctaaacaaaggaataaaggcagattataagcagtattgggatgtagaactt
ggtgttacttatattccatgggacaaagtcaagcctgaagaactggagagtttctgtgaa
ggaggaatgctggacagtgatacacttaatccagattggaagggaattcccaagaagcat
gaaaacgaagttgctcaaaatggaggagccgaaacctcacacacagaaccagtgtctccc
atacctaagcctctgcctgtgcctgtgcctcctattcctgttcccgcaccgataacagtg
ccgcctccacaggtcccaccgcatcagccaggacctcctgtagttggtgctctccagcca
cctgctttcacgcctcctttgggaattccacctccaggctttgggcctggtgttcctcct
cctccacctccgccaccatttttgcgcccaggattcaacccaatgcatttgccaccaggt
tttcttcctcctggacccccacctcctataactccaccagtatccattcctcctcctcac
actccaccaataagcatcccaaactctactatcgctggtataaatgaagacactacaaaa
gacttatctattggaaatcccattccaacagtggtgtctggggctagaggaaacgccgag
tctggtgacagtgtgaaaatgtatggctctgctgtgccacctgctgcacccacgaatctg
cctacccctcctgtaacccagcctgtttcacttcttggtacccaaggagttgcaccaggt
cccgtcattgggctccaggccccatccaccggtctccttggtgcccgacctggcatgatc
ccactccagcgcccaccaggaatgcctccacctcacttacagcggtttcccttgatgcca
cctcggcccatgcctccacacatgatgcaccgaggtccaccaccaggcccggggggcttc
ggaatgcctccaccacatggaatgaaaggcccattcccaccccatggccccttcgtcagg
cctggcgggatgccagggctcgggggcccggggccaggcccagggggtcctgaggaccga
gacggaaggcagccgccaccacagcagcaacagcagcagccacctgcacagccgccaccg
cagcagccgccgccagcccagcagccaccgcccgctcagcagcagccacagccattcaga
aatgacagcaggcagcagcagttcaattcaggtagagaccaagaaagatttggaagaaga
tcctttggaaatagggtggagaatgaccgggaacggtacgggaaccgtaatgatgatcga
gagaatagtaaccgtgagaggagagagtggggaaggaggagccccgaccgggacaggcac
agagacttggaagacaggaatagacgctctagcgggcatcgagacagagagagagattct
agagatagagagtctcgtagagagaaggaagaaaaccgaggcaaggagaagcccgaggtg
acagacagggcaggcagtaacaagaccgtggaacctcccattagccaagcgggaagcgta
gacactgtttcagaacttcctaagggggagcctgggcctgcagtcgcaaagccttctgaa
gagttacctgctgaggctacctcatccgtcaaccccgagaaggaccccggctcagcagca
gaggctcctcgttaa
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