Capra hircus (goat): 102169978
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Entry
102169978 CDS
T02910
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
chx04040
]
102169978
Ion channels [BR:
chx04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102169978
BRITE hierarchy
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GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Eap1
YVC1_C
Ank
Motif
Other DBs
NCBI-GeneID:
102169978
NCBI-ProteinID:
XP_005689926
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All DBs
Position
15:31874653..31911899
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AA seq
1262 aa
AA seq
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MAPVRISHVVSFSSQDPRYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFITLLPATMLMSLADSKQGKNRSGVRMFKDADFLAP
ASGESWDRLRLSCSQPFTRHQPFGLAFLRVCSSLDSLDDPAEGPSVAVSSGLSRGSSDAQ
ESGPSPWLANPSIRRTFFPDPQTTTKEISELRNILNQLQPGTLGRSACMVLSAAHRAPPA
RVANPETNHAEPGPTHQHSAEPRSEEQNAEKDVGRTKRRKVGARRPVSNSNSRPNQRRPA
KAGQREHLRPQARSSRAQESGWCPICAGSFSIDMLPQHAATCGGASPPPPASPASSPSSS
PHVLRFRCVALTPVPLVSRPQPNWTEIMNRKLKFPAPLLGAIQEGHIGLVQQLLEVGVEA
LGGGPGGPPRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDT
NQPAVVRHLLARLEREKGRKVDTRSSSLAFFDSSIDASRFAPGVTPLTLACQKDLYEVAQ
LLMGQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLA
AFQLSRELRHLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDLGEDSETE
PEAERLGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWK
LFIAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLVMET
QLSTFRGRSQSVWETSLHMVWVAGFLWFECKEVWIEGLRSYLLDWWNFLDMVILSLYLAA
FTLRLLLAGLAHKHCQDAPDGAACHYFTSAERSEWRTEDPQFLAEVLFAVTSMLSFTRLA
SILPAHESLGTLQISMGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNET
FQFLFWTMFGMEEHSVVDMPQFLVPEFMGRALYGIFTIVMVIVLLNMLIAMITNSFQKIE
DAADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAIFYLLRRVFRFICCCHFCCKTKK
PDYPPIPTFANPGAGAGPGEGERGSYRLRVIKALVQRYIETAQREFEETRRKDLGNRLTE
LTKTVSRLQSEVAGVQRAVVEAGPRRPPGGASILSRYITRVRNSFQNLGPPIPETPELTV
PVTVGTQESSETGLPDAGGAQAPASGESGPSSPAHVLVHREQESEGAGDLPQETDLGAKE
GT
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaggattagccacgtggtgtcattttcctctcaggatcccagatatcca
gtggagaatttgctgaacccagacagtcagaggggaccgtggctcagctgtcctcaggac
aagagcgggcagctgaaagtggagctgcagctggagagggcagtgcccattggctacatt
gatgtgggtaactgtggttgtgctttcctgcaaattgacgtgggtcgttcctcctggtcc
ctggacagacctttcatcaccctgctccctgcaaccatgctgatgtccctggctgattca
aagcaggggaaaaaccgctcaggggtccgcatgtttaaagatgctgatttcctggcccca
gcctctggtgagtcgtgggatcgacttcgcctgagctgctcccaacccttcacacgtcat
cagccctttggcctggccttcctgcgggtgtgttcctctctggactccttagacgaccct
gcggagggtccctctgttgctgtgagctcggggctgagccggggctcttctgatgctcag
gagtctggtcccagcccctggctggctaatccttccatccggaggacattcttcccagat
ccccaaacgaccaccaaggaaatctcagagctcaggaatatcctaaaccaactgcagccg
gggactctggggcgttcagcctgcatggtgctttcagctgcccacagggcacctccagcc
cgtgtggcaaaccctgaaaccaaccatgcagagccaggtcccactcatcagcacagcgca
gagcccagatcagaggagcagaacgcagagaaggacgtgggcaggacgaagaggaggaaa
gtgggagcccgcaggcctgtatccaactcaaactctcggccaaaccagcggaggccagca
aaggcaggccagagagaacacctgcggccccaggcccgaagcagcagagcccaggagagt
gggtggtgccccatttgtgcaggctccttcagcattgacatgcttccccagcacgctgcc
acttgtggaggggcctccccgcctcccccagcctctcccgcctcatcaccatcttcgtct
ccgcacgtactaaggtttcgttgtgtggcactaacaccagttcccctggtctccaggcct
cagcctaactggacagagatcatgaacagaaagctgaagttccccgctccactgctgggt
gccatccaggagggacatataggcctggtgcagcagctgctggaggtgggggttgaggcc
ctgggcggcgggccaggcgggcccccccggaatgtggaggaggctgaggaccgctcctgg
agggaggccctcaatctggccatccgcctgggccacgaggccatcactgatgtgctgctg
gccaacgtcaagttcgacttccgccagatccacgaggccctgctggtggctgtggacaca
aaccaacccgcagtggtgcgtcacctgctggcccggctggaacgcgagaagggccgcaag
gtggacaccaggtcttcctcactggctttctttgactcgtcgatcgatgcctcccgcttc
gcccccggggtcacgcccctcaccctggcctgccagaaggacctatatgaggtcgcccag
ctgctcatgggccagggtcacaccatcgcacggccacaccccgtctcctgcgcctgcctc
gagtgcagcaacgcgcgccgctacgacctgctcaagttctccctgtctcgcatcaacacc
taccgcggcattgccagccgcgcccatctctcactggccagcgaggacgccatgctcgct
gccttccagctcagccgcgagctccggcaccttgctcgcaaggagcctgaatttaagccc
gagtacattgccctggagtcgctgagccaggactatggctttgaactgctgggcatgtgc
cggaaccagagtgaggtcaccgcggtgctcaatgacctgggcgaggacagcgagactgag
cccgaggccgagcgtctgggccaggcctttgaggaaggcatccccaacctggcgaggctg
cgactggccgtcaactacaaccagaagcggtttgtagcacaccccatctgccagcaagtc
ctgtcctccatctggtgtgggaacctggctggctggcgtgggagcaccaccatctggaag
ctcttcattgccttcctcatcttcctcaccatgcccttcctctgccttggctactggctg
gcgcccaagtcccggcttggccgcctgctgaagatcccggtgctgaagttcctgctgcac
tcggcctcctacctgtggttcctcatcttcctgctgggagagtccctggtcatggagacg
cagctgagtaccttccgaggccgcagccagagcgtctgggagacttcactacacatggtt
tgggttgcaggcttcctgtggtttgagtgtaaggaggtgtggatcgagggcctgcgcagt
tacctcctggactggtggaacttcctggatatggtcatcctctccctgtacctggcggcc
ttcacgctgcgcctcctcctggccgggcttgcacacaagcactgccaggatgcccctgat
ggggctgcctgccactacttcacctcggctgagcggagtgagtggcgcacggaggacccc
cagttcctggctgaggtgctctttgctgtcaccagcatgctcagcttcacccgcctggcc
tccatcctgccggcccatgagtcgctgggcaccctgcagatttccatgggcaggatgatt
gacgacatgatccggttcatgttcatcctcatgatcatcctgactgccttcctctgtggc
ctcaacaacatctacgtgccctaccaggagaccgagcggctgggcaatttcaatgagacc
ttccagtttctgttctggacgatgtttggcatggaggagcacagtgtggtggacatgcct
cagttcctggtgccggaattcatgggccgggccctctatggcatctttaccatcgtcatg
gtgattgtgctgctcaacatgctcattgccatgatcaccaactcattccagaagatcgag
gacgctgctgacgtggagtggaagtttgctcgctcaaaactctacctatcctacttccga
gagggcctgacattgcctgtgcccttcaatatcctgccctcccccaaggccatcttctac
ctgctcaggagagttttccgcttcatttgctgttgccacttctgctgcaaaaccaagaag
ccagactatcccccaatccccacctttgccaatcctggggcaggggcagggcctggggag
ggagagcgtggatcctaccggcttcgggtcatcaaggccctggtgcaacgctacatagag
actgcccagcgggagtttgaggagactcgtcggaaagacctgggcaacagactgacagag
ctgaccaagacggtgtctcgactgcagagtgaggtagcaggtgtgcagcgggctgtggtg
gaggcagggccacgccggccgcccggaggagccagcatcctcagtcgctacatcacccga
gtgcgcaacagcttccagaacctggggccccccatccctgagaccccagagctgacagtg
ccagtgacagtggggacccaggagtcatcagaaacagggcttccagatgctggaggggct
caggctccagcctctggggaatctggcccctcctccccagctcacgtattagtgcacagg
gagcaagaatcagagggggctggggacctgccccaggagacagacctgggagccaaggag
gggacctga
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