KEGG   Capra hircus (goat): 102170019
Entry
102170019         CDS       T02910                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
chx  Capra hircus (goat)
Pathway
chx03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:chx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102170019 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:chx03021]
    102170019 (TAF5)
   03036 Chromosome and associated proteins [BR:chx03036]
    102170019 (TAF5)
Transcription machinery [BR:chx03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102170019 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     102170019 (TAF5)
Chromosome and associated proteins [BR:chx03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     102170019 (TAF5)
    STAGA complex
     102170019 (TAF5)
    TFTC complex
     102170019 (TAF5)
    SAGA complex
     102170019 (TAF5)
    SLIK complex
     102170019 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_Gbeta TFIID_NTD2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_WDR36-Utp21_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SPT8 WD_LRWD1 Tricorn_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 PEP5_VPS11_N RAB3GAP2_N Beta-prop_RIG_1st CDK5RAP3 eIF2A VPS8_N Cytochrom_D1 Beta-prop_ACSF4 LisH_PAC1 PROPPIN Late_protein_L2
Other DBs
NCBI-GeneID: 102170019
NCBI-ProteinID: XP_017897067
UniProt: A0A8C2R2B2
LinkDB
Position
26:complement(27780503..27795577)
AA seq 800 aa
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGGGGTTNSGPNGGGGNVAAASSAGGD
GGTPKPSVAVSAVAPAGAAPVPAAAPEASAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEADSAGAETASALLSRVTASAPGPSAPDPPVSGASGSAAVSGLATG
SVAPGKVGSVAVEDQPDVSAVLSAYSQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLKFS
RDGEILASGSMDNTVRLWDAVKAFEDVETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq 2403 nt   +upstreamnt  +downstreamnt
atggcggcgctggcagaggagcagacggaggtggcggtgaagttagagcctgagggaccg
ccgacgctgctacctccgcaggcgggggacggcgctggcgagggtggcggcggcacaacc
aacagcggccccaacggcggcggcgggaacgttgcggcggcgtcgtcggccggcggggat
ggtgggacccccaaaccctcggtggctgtctccgccgttgcaccggcgggggcggccccg
gtgcccgccgctgctccggaggccagcgctccccacgaccgacagactctgctcgccgtg
ctgcagtttctacggcagagcaacctccgcgaggccgaagaagcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggcagacagcgccggc
gctgagacagccagcgcgcttcttagccgggtcaccgcctcggcgcccggcccttcggcc
ccggatcctccggtcagcggcgcttcggggtccgccgccgtctcgggcttagcgacaggt
tctgtggctccgggtaaagttggaagtgtagctgtggaagaccagccagatgtcagtgcc
gtgctctcagcctacagccaacagggagaccccacgatgtatgaagaatactatagcgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagaactatcccaactcttt
tatcccctatttgtacatatgtatttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgagactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggcttattaaaagagcca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaaaaagaagcctaaaaaagatagtattggatccaaaagtaaaaaacaagatcccaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggataag
ataatgaatatgaaagaaaccacaaaacgagtacgcctggggccagactgtttaccttct
atttgtttctatacattcctcaatgcttaccagggtctcactgcagtggatgtcactgat
gattctagtttgatcgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctgatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagctgaagatcttgtat
ggtcacagtggtcccgtctatggagccagcttcagtccggataggaactacctgctctcc
tcttcagaggatggaactgttagattgtggagtcttcaaacatttacttgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtatcagggggccatgacagagtagctcggctgtgggctacagatcactatcagccttta
cggatatttgctggccatcttgctgatgtgaattgtaccagattccatccaaattctaat
tatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatgggaac
tgcgtaaggatattcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggtttgatggttggagaattaaaaggacacactgatacagtctgttcacttaaatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
gtcaaagcatttgaagatgtagagactgatgactttactacagccacggggcatataaat
ttacccgagaattcacaagagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttactcgaagaaacttggttctagctgcaggagcttacagtcctcaa
taa

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