Capra hircus (goat): 102170831
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Entry
102170831 CDS
T02910
Symbol
XPC
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
chx
Capra hircus (goat)
Pathway
chx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
102170831 (XPC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chx03400
]
102170831 (XPC)
DNA repair and recombination proteins [BR:
chx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102170831 (XPC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
102170831
NCBI-ProteinID:
XP_017922375
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Position
22:57976195..57999603
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AA seq
933 aa
AA seq
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MARKRAAGRGPRGQTAKGETKARRKEEEADVVKDEKPRKKSPPTKVARGKRKRGCGDAGS
SADGPVTRKAAKVSVKSEEPQAVKDEALSEGEDFRGLPSARRKGQPPEREAAADKGSCKG
DDEEDSEEDWEEVEEVSEPVPGAVGESAAFSASALPVKPVEIEIETPEQVKARERSEKIK
MEFETYLRRMMKRFSKEVHEDTHKVHLLCLLANGFYRNSICNQPDLQAIGLSIIPTRFTR
VPPRDVDVSYLSNLVKWFIGTFTVNAELSTNDQDGLQTTLERRFAVYSARDDXELVHIFL
LLLRALHLPTRLVLSLQPIPLKLSAAKGKKPSKERSTEAPGGSSEDSSHAPGKPSKGSRG
DDASSGGAGGARARGKGGKAAEGRRPRGESPSSGEDAGQARGQRRGTQRRVQSRRRQAAA
RVSYKEESGSGAASSGSDFEPSSEDSCRPSDEDSEPSLPRRRSAPAPQRMKAGSKSRSKS
QHGSRHPPPGFAEASASAAGSKLERGKKPSGAGGKAGSGQGAPGVDQWLEVFSEREEKWV
CVDCVHGVVGQPLTCYQYATKPVTYIVGIDGTGCVRDVTQRYDPAWLTATRKSRVDAAWW
AETLRPYRSPLVDREQREDQEFQAKHLDQPLPTVIGTYKNHPLYALKRHLLKFEAIYPET
AAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRARRARQAEPQ
LHDYNDLGLFGRWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPIGCVQLNLPNLHRVA
RKLNIDCAQAVTGFDFHKGYCHPITDGYVVCEEYRDVLLTAWENEQALIEKKEKEKREKR
ALGNWKLLVKGLLIRERLKLRYGAQSEAAAPHTDAGGGLSSDEEEGTSSQAEAARILAAS
WPQNREAEKPKCPRKTRREKKEAAAQLFPFEKL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaaacgcgcggctggccggggcccccgcggacagacggccaagggcgaaacc
aaagcccggcgcaaggaggaggaggcggacgtcgtcaaagatgagaaaccacggaagaag
agccctcccacaaaagttgcccgaggaaagaggaagagaggctgcggtgatgctgggagc
tcagcagacggtccagtgacaaggaaggcggccaaggtttcagtgaaatctgaagagccc
caggctgtaaaggatgaagccctcagcgaaggggaagatttcaggggcttgccgagcgcc
cgcaggaagggccagcccccggagcgagaggccgctgcggacaaaggcagctgcaagggg
gacgatgaggaagacagcgaggaggactgggaagaggtggaagaagttagtgagcccgtg
ccgggtgccgtgggggaaagcgcagccttctctgcatctgctctgcccgtgaagccagtg
gagatagagattgagacaccggagcaggtgaaggccagagaaagaagtgaaaagatcaaa
atggagtttgagacgtatcttcggaggatgatgaaacgtttcagtaaggaggttcatgag
gacacgcacaaggttcacctgctgtgtctgctggcaaacggcttctaccgaaacagcatc
tgcaaccagccagacctgcaagccattggcctctccatcatcccaacgcgcttcaccaga
gtgccaccccgagacgtggacgtctcctacctgtccaacctggtgaaatggttcatcggg
acattcacagtgaatgcggagctctcgaccaacgaccaggacggcctgcagacgacgctg
gagcggaggttcgccgtttactcggcaagagacgacnaggagctggtccatatatttttg
ctgcttctccgggccctgcatctccctacccgcctcgtactgtctctgcagccaattcct
ctgaagttatcagcagcgaagggaaagaaaccttccaaggaaagatccacagaggcgcct
gggggctcctcagaagactccagccacgctccgggaaagcccagcaaaggaagccgagga
gacgacgcgtcttctgggggcgctggtggggcccgtgccagagggaaggggggcaaggcg
gccgaaggcaggaggccacggggggagtccccgtccagcggggaggatgcgggccaggct
cggggacagagacgggggacccagaggcgagtgcagtcccggaggcggcaggcggctgcc
agggtgtcttacaaggaggagagcgggagcggcgcagccagcagcggctctgactttgag
ccttccagcgaggacagctgccgcccgtccgatgaggattccgagcccagcttgcccagg
cggcggagtgcccccgcccctcagagaatgaaggcggggtccaagagcaggtccaagtcc
cagcatggaagccgccatccgccccctggcttcgcagaagcatcggccagcgctgcgggc
agtaagctggagaggggcaagaaaccgtcgggggccggtgggaaggcaggcagcgggcag
ggggctcccggcgtggaccagtggctggaggtgttctcagagcgcgaggagaagtgggtg
tgtgtggactgtgtgcacggcgtggtgggccagcccctgacctgctaccagtatgccacc
aagcccgtgacctacatcgtgggcatcgacggcaccggctgtgtgcgtgacgtcacgcag
aggtacgaccccgcctggctgacggcgactcgcaagagccgcgtggacgctgcctggtgg
gcagagaccctgcgcccctaccggagcccgctggtggacagggagcagcgggaggaccag
gagtttcaggcgaagcacctggaccagcctctgcccaccgtcatcggcacgtataagaac
caccctctctacgcccttaagaggcacctcctcaagttcgaggccatctaccctgagacg
gccgctatcctcgggtactgccgcggggaggccgtctactccagggactgcgttcacacc
ctgcactccagggacacgtggctgaaacaagcgcgtgtggtgcggcttggggaagtgcca
tacaagatggtgaaaggctactccaaccgtgcccggagagcccgccaggccgagccacag
ctgcatgactacaacgacctgggcctgtttggcagatggcagaccgaggagtaccagccg
ccggtggccgtggatgggaaggtgccccggaacgagtttgggaacgtgtacctcttcctg
cccagcatgatgcccattggctgcgtccagctgaacttgcccaacctgcaccgcgtcgcc
cgcaagctgaacattgactgtgcgcaggccgtcaccggcttcgacttccacaaaggctac
tgccatcccataaccgacggctacgtggtctgcgaggagtacagagacgtgctcctgacc
gcctgggagaacgagcaggcgctcatagagaagaaggagaaggagaagagggagaagcgg
gctctggggaactggaagctgcttgtcaaagggctgctgatccgggagcggctgaagctt
cgctacggggcccagagtgaggcggctgctccccacacggatgcgggaggcgggctctca
tcagacgaggaggaggggaccagctctcaagcggaagcggccaggatcctggcggcctcc
tggccccaaaaccgagaggccgagaagccaaagtgccccaggaagaccaggagggagaag
aaggaagcggctgcccagctgttcccgtttgagaagctgtga
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