Capra hircus (goat): 102171308
Help
Entry
102171308 CDS
T02910
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
chx
Capra hircus (goat)
Pathway
chx04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
102171308 (SHANK2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_3
Ank_4
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
102171308
NCBI-ProteinID:
XP_017898638
UniProt:
A0A452FUR6
LinkDB
All DBs
Position
29:complement(48608422..49172550)
Genome browser
AA seq
1901 aa
AA seq
DB search
MPRSPTSSEDEMAQSCSDSTEESESDSSKGETIYDTIRATAQKPGGTRAEEGQAHTLVLR
IVIEDLQQTKCIRFNPDATVWVAKQRILCSLNQSLKDVLNYGLFQPASNGRDGKFLDEER
LLREYPQPMGKGIPSLEFRYKKRVYRQTNLDEKQLAKLHTKNNLKKCMDHIQHRSVEKIV
KMLDRGLDPNFHDLETGETPLTLAAQLDDPAEMIKALRNGGAHLDFRAKDGMTALHKAAR
TRNLLALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPCCCELLLHEHAAVSCKDENGWH
EIHQACRYGHVQHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGDKELK
NYNSQTPFQVAIIAGNFELAEYIKNHKETDVVPLVPTRRTVPAAPPLSRRPASGWAQSCI
LEEPSGLFPPAPGLHRTCSGEQAHWTSSVPFREAPAYSNRRRRPPSTLAAPRLLLRSNSD
NNLNAGAPDWAVCAATSHLSLSPQLLQQTPSKADGAAKTLGSYTPGPRSRSPSLNRLGGA
GEDAKRPQQPWHVGPAFPPGANKDALSAFEYPGPRRKLYSAVPGRLFVVVKPYQPQVDGE
IPLHRGDRVKVLSIGEGGFWEGSARGHIGWFPAECVEEVHCRPRDSQAETRADRSKKLFR
HYTVGSYDSFDASSDCVIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPAFPALQY
LESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVTMIRQGGNHLVLKVVTVTRSLD
PDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELASVRKKKDKPEEIVPAPKPSRAAES
VALESRVATIKQRPTSRCFPSVSDMNSVYERQGIAVMTPTVPGSPKGPFLGLPRGTMRRQ
KSIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSVPPSPPPPSPTAYN
CPKSPTPRVYGTIKPALNQNPAAKVSPAARSDTVATMVREKGLYHRREVDRYSLDSEDLY
SRGAGPQANFRGKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTC
SIPIPTIIVKEPSTSSSGKSSQGSSVEADPQASEQPGQLRPDDSLAASSPFAAAIAGAVR
DREKRLEARRNSPAFLSTDLGDEDVGLGPPAPRARPSKFPEEGGFGEEDGTEPLSSPAPR
EPENHFVGVGEAGAQGEAGRLPNAPGQAKAPEGSPAAPPRSGNVAGPENYVHPLTGRLLD
PSSPLALALSARDRALKESQQGPKGEAPKADLNKPLYIDTKMRPSGEAGFPPVGRQSGRG
PLRRQETENKYEADPGKERRDDKKGVLGSIVDASQQKSAGLLMVHTVDAARPEDFLQEED
EKADLETQPDHPPSEAPEGAPETEGAFPTPAGPEPAAAPATAPGRTIVAAGSMEEAVILP
FRIPPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRVASVPALSDLVKQKKNDTSQS
PSLNSSQPTNSADSKKPAGLSNCLPASFLPPPESFDAVTDSGIEEVDSRSSSDHHLETTS
TISTVSSISTLSSEGGENADTCTVYADGQAFMVDKPPVPPKPKMKPIVHKGNTLYHDALL
EEDVDSFVIPPPAPPPPPGGAQPGPTKVIQPRTSRLWGDVSEVKSPILSGPKANVISELN
SILQQMNREKSAKPGEGLEPTPGTKPAGLAPRGPEVMSTVSGTRSTTVTFTVRPGTSQPI
TLQSRPPDYESRNSGPRRAPSPVVSPTELSKEVLPAPLPAATAAPSPTLSDVFSLPSQPP
PGDLFGLNPVGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKEAFM
DNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtagccctacgtccagcgaggacgagatggcccagagctgctcagactccacg
gaggagtcggagtcggacagttccaagggggagaccatctacgacaccatccgggccacg
gcccagaagccaggcggcaccagggcggaggagggccaggcccacacgctggtgctgcgc
atcgtcatcgaggacctgcagcagacgaagtgcattcgattcaacccggatgccacagta
tgggttgcaaagcagcggattctgtgctcactgaaccagagcctgaaggacgtcctgaac
tacgggctgttccagccggccagcaacgggcgcgacggcaagttcctggacgaggagcgg
ctgctgcgcgagtacccgcagcccatgggcaagggcatcccgtccctggagtttcgctac
aagaagcgggtgtataggcagaccaacctggacgagaaacagctggccaagctgcacacg
aagaacaatttgaaaaaatgcatggatcacatccagcatcggtcagtggagaagatcgtc
aagatgctggaccgaggcctggatccgaatttccacgacctggagactggagagactccc
ctgaccttggccgctcagctggacgaccccgcggagatgatcaaggccctccggaacggc
ggggcccacctagacttccgcgccaaggatgggatgacagctctgcacaaagccgcccgc
accaggaacctgctggccctgaagaccctcttggagcttggcgcatccccggattacaag
gacagctacggcctgaccccactgtatcatacggcggtggtcgggggtgacccctgctgc
tgtgagctgctgctccacgagcacgcggccgtgagctgcaaagatgagaatggctggcac
gaaatccaccaggcctgcaggtacggccacgtgcagcatctggagcacctgctcttctac
ggggccgacatgggggcccagaatgcctcggggaacaccgccctgcacatctgcgccctc
tacaaccaggacagctgtgcacgtgtgcttctgtttcgaggtggagataaggaactgaag
aattacaacagccagaccccgttccaggtggcgatcatcgccggcaacttcgagctggcc
gagtacatcaagaaccacaaggagaccgacgttgtacccctcgtgccaaccaggaggact
gtccctgcggctcctcctctgtcccgtcgccctgccagcggctgggcgcagtcttgcatc
ttggaagagccctctggcctgttccctccggccccgggcttacaccggacgtgcagcggg
gagcaggcccactggaccagcagcgtgcccttccgagaggccccggcgtactccaaccgc
aggaggcggccccccagcacgctggccgccccgcggctcctgctgcgctccaacagcgac
aacaacctcaacgccggggcacctgactgggctgtctgcgcggccacctcccacctcagc
ctctcgccccagctgttgcagcagacgcccagcaaggccgacggggccgccaagaccctc
gggagctacacccccgggccccgtagccggtcgccctcgctcaacaggctgggcggagcc
ggcgaggacgccaagaggccccagcagccctggcacgtcggcccagctttcccgccagga
gccaacaaggacgcgctgtccgcctttgagtacccggggcccagacggaagctgtacagc
gcggtgcctgggaggctcttcgtcgtcgtcaagccataccaaccccaggtcgatggcgag
atccccctgcaccgtggcgacagggtcaaagttctgagcatcggcgaaggtggcttctgg
gaaggcagcgcccgtggccacatcggatggttccccgcggagtgtgtggaggaggtccac
tgcaggccccgggacagccaggcagaaactcgtgcagaccgcagcaagaaactcttccgg
cactacacagtcggctcctacgacagcttcgatgcctccagcgactgcgttatcgaggag
aagaccgtcgtcctgcagaagaaagacaatgagggcttcggattcgtgctccgaggggcg
aaagcggatacgcccatcgaagaattcacacccacgccggcgttcccagccctgcagtac
ctggagtctgtggatgaaggcggggtggcatggcaagccggactgaggaccggggacttc
ttgattgaggtgaacaatgagaacgtcgtcaaggtcggccaccggcaggtcgtgaccatg
atccgccagggagggaaccacctggtcctcaaggtggtcacggtgaccaggagtctggac
ccggatgacaccgcccggaagaaagctcctccgcctccaaagcgagctccgaccacggcc
ctcaccctgcgctccaagtccatgacctcggagctggaggagctcgcctccgtccggaag
aagaaggataaacccgaggagatcgtcccagcccccaagccatcccgggcggccgagagc
gtggcgctggagtccagggtagccaccatcaagcagcggcccaccagccggtgcttcccc
tccgtctcggacatgaactccgtgtacgaacgccagggcatcgccgtgatgacgcccacc
gtccccgggagcccgaagggcccgttcctgggcctccctcgaggtacgatgcggaggcag
aagtcaatagacagcagaatctttctatcagggataacggaggaggagcggcagtttctg
gccccgccgatgctcaagttcaccagaagcctgtccatgccagacacctccgaggacatc
ccgcccccgccacagtcggtgcccccgtctccaccgcccccctcccccaccgcctacaac
tgccccaagtccccgactccgcgagtctacgggacgatcaagcccgcgctcaaccagaac
cccgccgccaaggtgtccccggccgcccgctccgacacggtggccaccatggtgcgggag
aaggggctctaccacaggcgggaggtcgaccgctactccctggactccgaggacctctac
agtcgcggcgccggcccccaggccaacttccgcggcaagaggggccagatgcccgaaaac
ccctactccgaggtggggaagatcgccagcaaggccgtgtatgtgccggccaagcccgcc
cggcggaagggcatgctggtgaagcagtccaacgtggaggacagccccgagaagacgtgc
tccatccccatccccaccatcatcgtcaaggagccctccaccagcagcagcggcaagagc
agccagggcagcagcgtggaggccgacccgcaggcctcggagcagcccggccagctgcgg
ccggacgacagcctggccgccagcagccccttcgccgccgccatcgccggggccgtccgc
gaccgcgagaagcggctggaggcccggaggaactccccggccttcctgtccacggacctg
ggggacgaggacgtgggcctcgggccacccgccccccgggcgcgcccctccaagttcccc
gaggagggcggcttcggcgaggaggacggcacggagccgctgtcgtcaccggcaccccgg
gagcctgagaaccactttgtgggtgtgggtgaggccggagctcagggtgaggctggcagg
ctgccgaacgctccgggccaagccaaggcaccagagggcagccccgcggcgcccccccgg
agcggcaacgttgccggccccgagaactacgtgcatccactcaccgggcggctgctggac
cccagctcgccgctggccctggcgctgtcggcgagggaccgggccctgaaggagtcccag
cagggccccaaaggggaggcccccaaggctgacctcaacaagcctctctacatcgacacc
aaaatgcggcccagcggggaagcgggcttccctccggtcggcaggcagagcgggcggggg
cccctgcggcggcaggagacagagaacaagtacgaggccgacccgggcaaggagcgcagg
gacgacaagaagggcgtgctcggcagcatcgtggacgcgtcccagcagaagtcagccggg
ctgctgatggtccacacggtggacgcggccaggccggaggacttcttgcaggaagaggac
gagaaagccgacctggaaacgcagccagaccatccgccatccgaggcgcccgaaggcgcc
cccgaaactgaaggtgctttcccgacccccgcaggccccgagcccgcggccgcccccgcc
accgcgcctggcaggaccatcgtggcggcgggctccatggaggaggcggtgatcctgccg
ttccgcatccctcccccgcctctggcgtccgtggacctggacgaggattttattttcaca
gagccattgcctcctcccctggaatttgccaatagttttgatatccccgatgaccgggtt
gcttctgtccccgctctctcagacctggtcaagcagaaaaaaaacgacacttcccagtcc
ccttccttgaactccagccagccaaccaactccgcagacagtaagaagccggctggtctc
tcaaactgtctgcccgcctcattcctgccgccccctgaaagctttgacgccgtcacggac
tctgggatcgaggaggtggacagccggagcagcagcgaccaccacctcgagacgaccagc
accatctccacggtgtccagcatctccaccctgtcctccgagggcggggagaatgcagac
acctgcacagtctatgcagacgggcaagcctttatggttgacaaacccccagtacctccc
aagccaaaaatgaaacccatagtccacaaaggcaacaccctctaccacgacgcgctgctg
gaagaggacgtggacagctttgtgatccccccacccgcacctccgccgccgcctggcggg
gcccagcctggccccacgaaggtcatccagccaaggacctccaggctgtggggggacgtc
tcggaggtcaaaagcccgattctctcaggcccaaaggcgaacgtgattagtgagttaaac
tcaatcctgcagcaaatgaaccgagagaaatccgcaaagccaggggaaggactggaaccg
acgccgggaaccaagcctgccggcctcgcccccagaggccccgaggtcatgagcaccgtt
tcaggtacgcggagcacaacggtcaccttcaccgttcgccctgggacctcccagcccatc
accctgcagagccggcccccggactatgagagcaggaactcaggacccagacgcgccccc
agccccgtggtctcgccaacagagctgagcaaagaggtcctgcccgccccgctgcccgcc
gccacagcggccccctcgcccaccctctcggatgtcttcagccttccaagccagcccccg
cccggggacctgtttggcttgaacccagtgggacgcagcaggtcgccgtccccctccatc
ctgcaacagccaatctccaataagccttttacaactaagcctgtccacctgtggactaaa
cccgacgtggcggactggctggaaagtctgaacctgggtgagcataaagaggccttcatg
gacaatgagatcgacggcagccacctcccaaacctccagaaagaagacctcatagatctg
ggcgtgactcgagtcgggcacagaatgaacatagaaagggctctcaaacagctgctggac
agataa
DBGET
integrated database retrieval system
