Capra hircus (goat): 102171314
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Entry
102171314 CDS
T02910
Symbol
NUP50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102171314 (NUP50)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102171314 (NUP50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102171314 (NUP50)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102171314 (NUP50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
102171314
NCBI-ProteinID:
XP_017904383
UniProt:
A0A452G5Q7
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All DBs
Position
5:114511882..114531443
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AA seq
465 aa
AA seq
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MAKRIAEKELTDRNWDQEDEAEEVGTFSVASEEVLKNRAIKKAKRRNVGFESDGGGAFKG
FKGLVASSGGGGFSGFGNGAGGKPLEGLSNGNSITSAPPFSSMRTATETKASFGSTAING
PTSLVDKKISTPKTNGDSQQPSSSGAARHGNAYHKQLAALNCSVRDWIVKHVNTNPLCDL
TPIFKDYEKYLASIEQQHGNSGSSSSESEANKISVEAQPPSLFGSTKLQPESPFLFHVSK
TEDVSEKKVEAVSEKSKDPSLGATSASFNFGKKIESSVMGSLNSGPLTGFSFSSGNSSLF
GKDTTQSKPVSSPFSTKTLESQAESGGSECRGGDEEENDEPPKVVVTEVKEDDAFYSKKC
KLFYKKENEFKEKGVGTLHLKPTANQKTQLLVRADTNLGNILLNILIAPSMPCTRTGKNN
VLVVCVPNPPVDEKNAATPVPMLIRVKTSEDADELHRILLEKKGA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaatcgccgagaaggaattgacagataggaattgggatcaagaagatgaa
gcagaagaggtgggaacgttttcggtggccagtgaggaagtcttgaagaatagagccata
aagaaagcaaagcgtagaaatgttggattcgaatctgatggtggaggggcctttaaaggt
tttaaaggtttggttgcatcttctggaggaggagggttttctggatttggtaatggtgct
ggagggaagcctctggaaggactgtcaaacggaaacagcataactagtgcccctcccttc
tccagcatgaggacagcaactgagaccaaggcctccttcggatctactgctataaatggc
cctacctccttggtcgataaaaagatttcaactcctaaaactaacggtgacagtcagcag
ccttcctcctctggtgctgctcgccacgggaacgcctatcacaaacagctggcagcttta
aactgctccgttcgggattggatcgtgaagcacgtgaacacaaacccgctctgcgacctc
acacctatctttaaagactatgagaaatacttagcaagcattgaacagcaacacgggaac
agtggcagcagtagttctgaaagtgaagccaacaaaatatcagttgaagcacagcctcct
tctctatttggttcaacaaaattacaaccagagtcaccatttttgtttcatgtcagcaaa
acggaggatgtgtctgaaaagaaggtggaagctgtgtctgaaaagagcaaggacccatca
ctaggagccacaagtgcctcgtttaattttggcaagaaaattgagagttctgttatgggc
tccttaaattcgggccccttgactggattttcattttcttctggaaactccagtttattt
ggcaaagatactacccagagtaaaccggtttcttcaccattttccactaaaacattggag
agccaagcagaaagtggcggcagcgaatgcagaggtggagatgaagaagagaatgacgag
ccaccaaaagtagtagttactgaagtaaaagaagacgatgctttttactccaaaaagtgt
aaactattttacaagaaagaaaatgaatttaaagagaagggtgtgggcactctgcattta
aaacctacagcgaatcagaagacacagctgttagtgcgggcagacaccaatttaggcaac
atactgctcaacatcctgattgcacccagcatgccatgcacccgcacagggaagaacaac
gtgctcgtcgtctgcgttccaaacccacccgtcgatgagaagaacgccgccacccccgtc
cccatgttgatccgggtgaagacaagcgaggacgcggatgagctgcacagaatcctgctg
gagaagaagggtgcctga
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