Capra hircus (goat): 102171399
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Entry
102171399 CDS
T02910
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102171399 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102171399 (EXOSC1)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102171399 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
102171399 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
102171399
NCBI-ProteinID:
XP_005698343
UniProt:
A0A452EPR5
LinkDB
All DBs
Position
26:32953738..32960158
Genome browser
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNLEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVISVMRETE
SQLLPDVGAIVTCKVSSINSRFAKVHILYVGSTPLKNSFRGTIRKEDVRATEKDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcgccacccgtgaggtactgcatccccggcgaacgtctgtgtaacttggaggagggc
agcccgggcagcggcacctacacccggcacggctacatcttttcgtcgcttgctggctgc
ttgacaaagaccagcgagaacggcgcgcttcctgtcatatctgtgatgagagaaacagag
tcccaattactgccagatgtaggagctattgtaacctgcaaggtctccagcatcaattca
cgctttgccaaagtacacatcctatatgtggggtccacgccacttaagaactcttttcga
ggaaccatccgcaaagaagacgtccgagctactgaaaaagacaaggttgaaatttataag
agtttccgcccaggggacatcgtcttggccaaagtgatctccctaggtgatgcgcaatcc
aactacctgctaaccactgccgaaaatgagctgggagtggtggtggcccacagcgaatca
ggtgtccagatggtccccatcagctggtgtgagatgcagtgcccgaagacccacaccaaa
gaattccggaaggtggcccgagtgcagcctgagttcctgcagacctaa
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