Capra hircus (goat): 102171636
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Entry
102171636 CDS
T02910
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
chx
Capra hircus (goat)
Pathway
chx00310
Lysine degradation
chx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102171636 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
102171636 (PRDM2)
03036 Chromosome and associated proteins [BR:
chx03036
]
102171636 (PRDM2)
Enzymes [BR:
chx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
102171636 (PRDM2)
Transcription factors [BR:
chx03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102171636 (PRDM2)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102171636 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_ZNF462_1st
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
102171636
NCBI-ProteinID:
XP_017916089
LinkDB
All DBs
Position
16:complement(52261196..52393168)
Genome browser
AA seq
1700 aa
AA seq
DB search
MNQNAAEPVATTETLAEVPEHVLRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFV
GDKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINR
AIYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQESKN
KANKTEDVQLKTSEPDPSPANMRDSAEGPKDEDEKPSASATEQPAVPQEIVSQDVPPEFA
LPPPAHEPQTGPDAEQEAALCEANEVVEEEEEEEEEELEEDGDEAADVPNQSSLREPEIR
CDEKPEDLLEEPKTVSKETLEDSAEAAPVVKTPRAREEANGDVFETFLFPCQHCERKFTT
KQGLERHTHIHMSTASHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKLEDPAGSKAPSD
DAPPQDDTQPPGLGHDGLTLSSEKVSQDSVTPSVVEENGEAKELHPCKYCKKVFGTHTNM
RRHQRRVHERHLIPKGVRRKGGLLEEPQPPAEQAPPAPSIYVPSTDPEEEGEADDVYIMD
ISSNISENLNYYIDGKIQTSSSTSNCDVIEMESNSADLYGINCLLTPVTVEITQNIKTTQ
VPITDDLPKEPSSSTNSESKKRRTASPPVLPKIKAETESDPATPSCSLSLPLSISTTEAV
SFHKEKSVYLSSKLKQLLQTQDKLTPPAGISAAEIPKLGPVCVSAPASMLPVTSSRFKRR
TSSPPSSPQHSPALRDFGKPGDGKAMWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGS
PPGFDEYKVSNEWAASSAFSSVCNQQPLDLSSGVKQKAEGPGKAPVQWEAVLDLSVHKKP
CGDSEGKEFKENHVLQPSCSAVKKRKPTTCMLQKVLLNEYNGVDLPVENAPEASGSASPC
KPLDPQPDPDLGLNSSSSATVVEAPPDVSSSSPALQPPSLSCGRLPPLLTPTTPSSPPPC
PPVLTVATPPPPLLPTVVLPAPSAGASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPS
VEPVMSGASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSAVSSVVSSGDNLETSLPM
ISFKQEELESEDLKAREEAPSATEQEIVQETFNRNFVCNVCESPFLSIKDLTKHLSIHAE
EWPFKCEFCVQLFKVKTDLSEHRFMLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDTV
CTHHEFESGTLRPQNFTDPSKAHVEHMQSLPEDPLEASKEEEELNDSSEELYTTIKIMAS
GMKTKDPDVRLGLNQHYPSFKPPPFQYHHRSPLGIGVTATNFTTHNIPQTFTTAIRCTKC
GKGVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDNSGKNAFRRMG
QPKRLNFSVELSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKTTPESSSHVCP
YCHREFTYIGSLNKHAAFSCPKKPLSPSKKKLSHSSKKGGHQSPAGSDRNNSSSHRRRTA
DAEIKMQSMQAPLGKTRARSSGPSQVPPPASSFRSKQNVKFAASVKSKKPSSSLRNSSPI
RMAKMTHSESKKPKAAAKNHAAPLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFSV
KSRERSGGPITRSLQLAASADPSENRKEDGSGKQELKDLSYSLRLASRCPPPAAPYITRQ
YRNVKATAAAQLQGSLFKDT
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacgcagctgagcctgtggcaaccacggagaccctggccgaggtacctgaa
catgtgcttcgaggacttccggaagaagtgaggcttttcccatctgctgttgacaaaact
cggattggtgtctgggccactaaaccaattttaaaaggcaaaaagtttgggccatttgtc
ggtgacaagaaaaaaagatctcaggttaagaataatgtatacatgtgggaggtctattac
ccaaatttgggatggatgtgcattgatgccaccgatccagagaaggggaactggctgcgc
tatgtgaattgggcttgctcaggagaagagcaaaatttatttccactggaaatcaacagg
gccatttactataaaactttaaagccaatcgcgccgggcgaggagctcctggtctggtac
aatggggaagacaaccccgagatagcagctgcgattgaggaagagcgagccagcgcccgg
agcaagcggagctccccgaaaagcaggaaagggaagaaaaaatcccaagaaagtaaaaac
aaagcaaacaaaaccgaagacgtacagctgaagacaagtgagccagatcccagccctgca
aatatgagagattctgcggaaggccccaaagacgaagacgagaagccttccgcttccgcc
actgagcaaccagccgtccctcaggagatcgtgagccaggatgtgcctccggagttcgcc
ctccctccccctgcccacgagccccagacaggaccagacgcagagcaggaagcagcgctc
tgtgaggcgaatgaggtggtggaggaggaggaggaggaggaagaggaggagctggaagaa
gatggggacgaagcagctgatgtgccaaatcaaagttccctgagagagccggagatccgg
tgtgatgagaagcccgaggatttgttagaagaaccaaaaactgtttcaaaggaaactctt
gaagactctgcggaggcagcccctgttgtgaaaactcccagagccagagaagaggccaac
ggggacgtgtttgaaacgtttctgttcccatgtcagcactgcgagaggaagttcacgacc
aagcaggggctggagcggcacacacacatccacatgtccacggccagccacgccttcaag
tgcaagtactgcgggaaggccttcggcacacagatcaaccggcggcgccacgagcggcgc
cacgaggccgggctgaagcgaaagctcgaggacccggccggcagcaaggcgcccagcgac
gatgctcctccccaggacgacacacagccccccggtcttgggcacgatggcctgaccttg
agttcagagaaggtgtcccaggactcagtgactccttccgtcgtagaagagaatggcgaa
gctaaagagcttcacccgtgcaagtactgtaagaaggttttcggcactcacacgaatatg
agacggcatcagcgcagagttcacgagcggcacctgattcccaagggggtgcggcggaaa
gggggcctcctggaagagccacagcccccagcagagcaggcccctcccgccccaagtatc
tatgtccccagcacagacccagaggaggaaggggaggcggacgatgtgtacatcatggat
atttccagcaatatctctgagaacctaaattactacattgatggtaaaattcagaccagc
agcagcaccagtaactgtgacgttattgagatggaatccaattcggcagacttgtacgga
ataaactgtctgctcactccagtcacagtggaaatcactcagaacataaagaccacgcag
gtccctataaccgatgatctccctaaagagccttccagcagcacaaacagcgagtccaag
aaacggaggactgctagtccgcccgtgttacccaaaattaaagccgagactgagtctgat
cctgccacaccttcgtgttccttgagtctgcctctcagcatatcaaccacagaggcggtg
tctttccacaaagagaaaagcgtgtatttgtcatcaaagctcaaacagcttcttcagacc
caggataaattaacgcctcctgcagggatttcagccgctgagatacccaagttaggccct
gtctgcgtgtccgctcctgcgtcgatgctacctgtgacttctagcaggtttaagaggcga
accagctctccccccagctctccccagcacagccctgccctgcgagactttggaaaacca
ggagatgggaaagccatgtggactgaggcagttctaagctccaaaaaacccaaattagag
agtcacagcaactcaccagcatggagtttgtctgggagagatgagagagaaactgggagc
ccgccgggctttgatgaatataaggtgtctaacgaatgggcagctagctctgcttttagc
agtgtgtgcaaccagcagccactggatttgtccagtggtgtgaaacagaaggctgagggg
ccaggcaaggctccggtccagtgggaagctgtgttagatctcagtgtgcataaaaagccc
tgtggtgactctgaaggcaaggaattcaaagaaaaccatgtgctgcagccatcctgcagt
gctgtgaagaaaaggaaacccaccacctgcatgctgcagaaggtccttctcaacgaatac
aacggcgtcgacctccctgtggaaaacgctccagaggcatccggaagcgccagtccctgt
aaacctctagatcctcagccagaccctgaccttggtctcaactccagctcgtctgccact
gttgtcgaggctcctcctgacgtttcctcatcgtcacctgccctgcaaccaccttccctc
tcttgcgggcggctgccgcctctcttgacccccacgaccccctcctctcctccgccctgt
ccccccgtgttaacggttgccactccgccccctccgctgcttcctactgtcgttcttcca
gccccctctgctggggcgtccccccacccgtgtccctccccactctcgaatgccaccgca
cagtccccacttccaattctctccccgacggtgtccccctcgccgtcccccattccctcc
gtggagcctgttatgtctggtgcttcaccggggcctccaacactctcctcatcttcctcc
tcttcttcctcctcttccttctcatcttcctcctcctcctcttccccttcaccgcctcct
ctctcagcagtgtcatccgtggtttcctctggggataatctggaaacctctctccccatg
atatcttttaagcaggaggaactagagagtgaagacctgaaagccagggaggaagcccca
tccgccactgagcaggagatcgtccaggagacattcaacaggaactttgtctgcaacgtc
tgtgaatcaccttttctttccattaaggatctaaccaaacatttatccattcacgctgag
gaatggcccttcaaatgtgaattttgtgtgcagctcttcaaggtgaaaactgatctgtca
gaacaccgcttcatgcttcacggcgttgggaatatcttcgtgtgctcagtttgtaaaaag
gagtttgcgttcttgtgcaatctgcagcagcaccagcgagatctccacccggatacggtg
tgcacgcaccacgagtttgaaagcggcaccctgaggccccagaactttacggatcccagc
aaggcccatgttgagcacatgcagagtttgccagaagaccctctagaagcgtctaaagaa
gaggaggagttgaacgattcttccgaagagctttacacgaccatcaaaataatggcttcc
ggaatgaaaacaaaggatccagatgttcgattgggtctcaaccaacattacccaagcttt
aaaccacccccgtttcagtaccatcaccgcagccccctgggcattggtgtgacggccaca
aacttcactacgcacaacatcccacagacatttaccaccgccatccgctgcaccaagtgc
gggaaaggcgtggacaacatgcctgaactgcacaaacacatcctggcatgtgcctctgcg
agtgacaagaagaggtatacccccaagaaaaacccggtcccactgaagcagactgtgcaa
cccaaaaatggcgtggtggttctggacaactctgggaaaaacgccttcagacgaatgggc
cagcccaaaagactgaactttagtgtggagctcagcaaaatgtcctcgaataagctcaag
ttaaacgcgttgaagaaaaagaaccagctcgtccagaaagcaatcctacagaaaaacaag
tctgcaaagcaaaaggctgacctaaaaaccactcctgagtcgtcctcgcacgtctgccca
tactgccacagagagttcacgtacatcgggagcctgaacaagcatgctgctttcagctgt
cccaaaaaacctctttctccttccaaaaaaaaactttcccactcttccaagaaagggggg
caccagtcacctgccgggagtgacagaaacaacagcagcagccaccgcagacggacagca
gacgccgagatcaaaatgcagagcatgcaggcacctctgggcaagaccagagctcgcagc
tcgggcccctcacaggtcccaccacccgcctcgtccttcaggtccaagcagaacgttaaa
ttcgccgcttcggtcaagtccaaaaaaccaagctcctctttaaggaactcgagccccata
cgaatggccaaaatgactcacagcgagagcaagaagcccaaagctgcagccaagaaccat
gcagctcccctctcaggcaagacgtcgaggagcctgcacgtgcgggcgcagaaaagcaga
gccgtcttacagagcaagtcggccttggccagtaagaaacggacagacaggttcagtgta
aaatccagagaacggagtggggggccgatcacccgaagcctgcagctggcggcttctgcc
gaccccagtgagaacaggaaggaggacgggagtggcaagcaggagctgaaggacctcagc
tacagtctccgcctggcatcccgatgtcctccgccagccgccccgtacatcaccagacag
tataggaatgtcaaggccacagctgcagcccagctccagggatccctcttcaaagacacc
tga
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