Capra hircus (goat): 102171645
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Entry
102171645 CDS
T02910
Symbol
NUP88
Name
(RefSeq) nuclear pore complex protein Nup88 isoform X1
KO
K14318
nuclear pore complex protein Nup88
Organism
chx
Capra hircus (goat)
Pathway
chx03013
Nucleocytoplasmic transport
chx05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102171645 (NUP88)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102171645 (NUP88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102171645 (NUP88)
Messenger RNA biogenesis [BR:
chx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102171645 (NUP88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF659
FliJ
Motif
Other DBs
NCBI-GeneID:
102171645
NCBI-ProteinID:
XP_005693498
UniProt:
A0A8C2S5J8
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All DBs
Position
19:25940868..25962444
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AA seq
742 aa
AA seq
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MAGAEGGPGDGELWQTWLPNHAVFLRLREGLKNQSSAETEKPASSLPSSPPLPPQLLTRN
LVLGLGGELFLWDPEDSSFLVVRLRGPSGVGEEPSLSQYQRLLCINPPLFEIYQVLLSPT
QHHVALIGIKGLMILELPKRWGKNSEFEGGKSTVNCSTTPVAERFFTSSTSLTLKHAAWY
PSEMLEPHIVLLTSDNIIRIYSLREPQTPTKVIVLSEAEEESLILNKGRAYTASLGETAV
AFDFGPLSAVPKHIFGQKGKEEVAAYPLYILYENGETFLTYISLWHSPGSVGKLLGPLPM
HPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDSRADL
IPSLYVFECVELELALKLASGEDEPFDSDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGLT
WIHKLHKFLGSDEEDKDSLQELATEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPT
MICVTSTYECLVRPLLSTVHPASPPLLCTREDVEVAESPLRILAETPDSFEKHIRSILQR
SVANPAFLKSSEKDMAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKK
KQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHSQLPVLSDSER
DMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILK
EEGEHIREMVKQINDIRNHVNF
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgccgaaggaggcccgggcgacggtgagctgtggcagacctggttgcccaac
cacgccgtgttcttgcggctccgagagggactgaaaaaccagagctcagccgaaactgag
aagccagcttcatcattgccttcgtcgccgccgctgcctcctcagttgctgactagaaac
ctggtcttgggcctcggcggagaactctttctatgggacccagaagacagctccttctta
gtcgtgcgccttcggggccccagcggcgttggtgaggagccctccctctcccagtaccag
agattgctttgcataaatccacccctgtttgaaatctatcaagtcttgttaagcccaaca
caacatcatgtagcacttataggaataaaaggacttatgatattagaattacctaaaaga
tggggaaagaattctgaatttgaaggtggaaaatcaacagtgaattgtagtaccactccc
gttgctgagagatttttcaccagttcaacctctctgactctgaagcatgctgcctggtat
ccgagcgagatgctagagccccacatagtgctgttaacgtcagacaacatcataagaatt
tactctttgcgtgagccccagacaccgactaaggtcattgtactttcagaagcagaagag
gaaagtctaatactcaacaaaggaagggcctacactgcatctctgggagagacagcagtt
gcgtttgactttgggccattgtcagcagtcccgaagcacatatttggacaaaaaggcaaa
gaagaagtagcagcttaccctctgtacatcttatatgagaatggggagactttccttaca
tacattagtctgtggcacagccctgggagtgtgggcaagctgttgggcccgttgcccatg
catcctgctgctgaagataactatggctatgatgcttgtgctgtgctctgcttgccgtgt
gtccctaacatcctggtgattgctactgaatcaggaatgctgtatcactgtgttgtgctg
gagggggaagaagaagatgaccaaacatcagaaaagtcctgggactccagggctgacctc
attccgtctctgtatgtgtttgagtgtgttgagttggagcttgccctgaaactggcatct
ggagaggatgagccctttgattctgacttttcttgtccaatcaaacttcacagagatccc
aagtgtccttcaagataccactgtactcatgaagctggtgtacatagtgttgggctaact
tggattcataaacttcacaagtttcttgggtcagatgaagaagataaggacagtttacag
gaactggctacagaacagaaatgctttgtagaacacattctttgtacaaagccgctgcca
tgcaggcagccagctccgattcgaggattctggattgtccctgacatcctggggccaaca
atgatctgcgtcaccagtacctatgaatgcctcgtcaggcctttactaagcacagtccat
ccagcgtctcctcccctgctttgtacccgagaggatgttgaagtagcagagtctcccctc
cgtattctcgctgaaaccccggattcctttgaaaagcatattagaagcattttgcaacgt
agtgttgcaaatccagcatttttgaaatcatctgaaaaagatatggctcctcctcccgaa
gaatgtcttcagctcatcagcagagccacccaggtgttcagagaacagtacattctaaaa
caggacctggcaaaggaggagattcagcggagggtcaaactgttatgtgaccaaaaaaag
aaacaattagaagatctcaactattgtcgagaggagaggaaaagtctacgggaaatggct
gagcgcttagccgacaaatacgaggaagccaaggaaaaacaagaagacatcatgaacagg
atgaaaaaagtacttcacagttttcactctcagctcccagttctctctgacagtgagaga
gacatgaagaaagaattacagctgatacctgatcaactcagacatttgggcaatgccatc
aaacaggttactatgaaaaaagactatcaacaacgaaagatggaaaaggtactgagtcct
caaaagcccaccattactctcagcgcctaccagcgaaaatgcattcagtccatcctgaag
gaggagggtgagcacataagagaaatggtgaagcaaattaacgacatccgaaatcatgta
aacttctga
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